Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0761 ATGTTCATACACGCGCTAAAACCTCTTACAATGAGAGTTTCGGCTCAGAATAATAATTCTGGGAAGGAGAGCAGCTCGACCTCGCCGTCGGAGGCGGCGCCGCCGTTAGAGTCGAAAACGGAAAAGCGAAACCGGGAATCAAACAAGCATCCGGTGTACCGAGGGGTGCGAATGCGGAACTGGGGAAAATGGGTGTCGGAAATCCGCGAGCCGCGGAAGAAATCGAGAATATGGCTGGGGACATTCCCGACGCCGGAAATGGCGGCTAGGGCGCATGACGTTGCAGCGCTGAGCATAAAGGGGAACAGCGCCATCCTCAACTTCCCCGAACTCGCCGCCTCGCTTCCTCGTCCCGTGTCATTGGCCCCTCGCGACGTGCAAGCCGCAGCGGCCAAAGCGGCTCACATGGACTTCCCTCCTTCGTCCACGTCATTATCATCATCATCGTTGGTCTCAACAACCTCCTCGTCCTCGTCTTTATCCTCGTTGGTTTCAACCGCGGACTTGTCCACTGAGTCGGAGGAACTGAGCCAGATCATCGAGTTGCCGAGGTTGGAAACGAGTTACGAGTTGGGAAACGAGTTTGTGTTCGCGGACTCGCAGGACACGTGGATGTACCAGCCACCGATACCTTGGTTGCAAACCACGTACGATGCTTCTCATGCCGATGATGATATTGCAGTGGCAGAGACTGGGCTTGTCACTACTTTTAAGAGTTTTCTGTGGGATTACTGA 735 0.5483 MFIHALKPLTMRVSAQNNNSGKESSSTSPSEAAPPLESKTEKRNRESNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAASLPRPVSLAPRDVQAAAAKAAHMDFPPSSTSLSSSSLVSTTSSSSSLSSLVSTADLSTESEELSQIIELPRLETSYELGNEFVFADSQDTWMYQPPIPWLQTTYDASHADDDIAVAETGLVTTFKSFLWDY* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0761 244 MobiDBLite consensus disorder prediction 11 34 - -
Pvu1g0761 244 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Pvu1g0761 244 MobiDBLite consensus disorder prediction 36 51 - -
Pvu1g0761 244 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 243 - -
Pvu1g0761 244 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 17 243 - -
Pvu1g0761 244 Pfam AP2 domain 51 101 IPR001471 GO:0003700|GO:0006355
Pvu1g0761 244 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Pvu1g0761 244 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Pvu1g0761 244 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Pvu1g0761 244 CDD AP2 53 111 IPR001471 GO:0003700|GO:0006355
Pvu1g0761 244 MobiDBLite consensus disorder prediction 7 51 - -
Pvu1g0761 244 Gene3D AP2/ERF domain 52 110 IPR036955 GO:0003700|GO:0006355
Pvu1g0761 244 SUPERFAMILY DNA-binding domain 52 110 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0761 Pvu-Chr1 10050549 10051844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0761 23 218 AP2-EREBP Transcription Factor Family AT5G11590 67.822 4.60e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu1g0761 AP2 2.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0761 K09286 - gmx:100816404 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0761 1 10050549 10051844 Pvu1g0761 1 10050549 10051844 ECH
Pvu9g1124 9 16431520 16432907 Pvu1g0761 1 10050549 10051844 PCT