Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0758 GAGAACAGGAAAACAAATCAACCACAGCTATTGTATGAGTCCAAGTTATATAATATTCTTCAAGGAGGAAGTGGAATTCCAAGAATGAAATGGTGTGGTACTGATGGGGACAACAATGTTCTTGTTATTGAACTTCTGGGACCAAGTCTTGAAGATCTCTTTTACTTCTGTGGGAATAAATTATCACTCAAAACAGTTTTGATGCTAGCTGATCAGATGCTTACAAGGATAGAGTATTTGCATTCCAAAGGATTTTTGCATAGAGACATTAAACCGGATAACTTCCTTATGGGTCTTGGAAAGAAAGCAAATCAGATATACATGATTGACTTTGGACTAGCAAAAAGATATAGGGATCCAATCACAAATAAGCATATCCCTTACAGAGAGAACAAAGGCTTAACAGGGACTGCACGTTATGCAAGTTACAATACTCACTTGGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGTCTTCCATGGCAAGGTTTGCAAGCTGCAACCAAACAACAAAAGTATGATAAAATTTGCAAAAAGAAGTTATCAACACCCATTGAGGTACTTTGCAAGTCTTATCCTGTGCAATTTGCTTCTTACTTTCATTATTGCCGCTCTTTGACATTTGATCAACGACCAGATTATTCTCTTTTGAAGCGTCTATTTCATAATTTGTTCACTCGTGCAGGTATTAACTTTTGA 738 0.3672 ENRKTNQPQLLYESKLYNILQGGSGIPRMKWCGTDGDNNVLVIELLGPSLEDLFYFCGNKLSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGKKANQIYMIDFGLAKRYRDPITNKHIPYRENKGLTGTARYASYNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAATKQQKYDKICKKKLSTPIEVLCKSYPVQFASYFHYCRSLTFDQRPDYSLLKRLFHNLFTRAGINF* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0758 245 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 242 - -
Pvu1g0758 245 SMART serkin_6 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0758 245 Pfam Protein kinase domain 4 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0758 245 SUPERFAMILY Protein kinase-like (PK-like) 7 243 IPR011009 -
Pvu1g0758 245 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0758 245 Gene3D Transferase(Phosphotransferase) domain 1 1 245 - -
Pvu1g0758 245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 85 97 IPR008271 GO:0004672|GO:0006468
Pvu1g0758 245 PANTHER CASEIN KINASE-RELATED 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0758 Pvu-Chr1 9955619 9960725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0758 61 228 MAP Kinase Kinase Kinase AT1G62400 30.357 2.20e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pvu1g0758 Pkinase 3.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0758 K08960 - gmx:100782913 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1112 9 16324586 16332441 Pvu1g0758 1 9955619 9960725 PCT