Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0747 ATGTCGTTTCAGGACTCGGACAAAACGAAGTCAGAGGCGAGTGCATTCGACGCGCCGGCGGCGTCGCGGCTCGTGACGGAGTTGCGTGGAGCCTTCGCTTCGGGCAAACCTAGCAGTTACGAGTGGCGAGTGTCGCAGGTCAAAGCGCTCGCGAAACTCGTCGCCGATCACGAGCAGGAGATCGTCGACGCGCTCCAAAAGGACCTCGCGAAGCCGCCGCTCGAAACCGTCGCTTACGAGATTGCTATGTTGAAAAACTCATGTAAAGTTGCGCTCAAAGAATTGAAACATTGGATAACTCCCGAAAAGGTCAAAACTTCACTCGCAAGTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGCTAGTCATCTCGGCATGGAACTACCCTTTTCTGTTGTCACTTGATCCAGTCATTGGAGCTATAGCAGCTGGTAATGCTGTGGTTTTAAAACCATCGGAAATTGCTCCAGCCACATCGTCACTGTTGGCAAAACTGCTGGGAGACTACATGGATAAGTCATGTATTAGAGTTGTTGAGGGAGCAGTTGATGAAACTTCCGCATTGCTACAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGACGAGTTGCACGTATTGTGATGGCTGCTGCTGCAAAACACCTAACACCAGTTGTGCTGGAGCTCGGAGGAAAATCTCCAGTTGTTGTTGATTCAAACATCAATTTAAAGGTAGCAACAAGACGAATAATTGCCGGAAAGTGGGGTTGTAATAATGGACAAGCTTGCATTTCTCCAGATTATGTTATAACAACAAAAGAATATGCTGCCAAGTTGGTGGATGCGCTAAAGACTGAATTGGAGAAATTTTATGGAAAGAACCCATTGGAATCAAAAGATTTGTCCCGTATTGTGAACTCCAATCACTTTAATCGCTTGAAAAAACTCTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGCGAAAAGGATGAAAGCAAATTGAAGATTAGCCCCACTGTTCTATTGGATGTCCCACGGGATTCTTTGATTATGAGTGAGGAGATATTTGGTCCTTTGCTTCCCATCCTCACGGTAGACAAACTGGAAGAAAGCTTTCAAGTGATCAATTCAGGACCAAAGCCTCTCGCTGCATACATATTTACAAATAACAAGAAGCTCAAGGAGCTATTTGTTATGAATATTTCAGCTGGCGGCTTGGTTGTTAATGACACCACTTTACATCTTGCGGTTCATACTTTGCCATTTGGAGGAGTTGGTGAGAGTGGAGTGGGGGCATACCACGGGAAATTCTCATTTGATGCATTTAGCCACAAAAAGGCAGTTCTCTATCGCAGTTTTATTGGTGATGCATCAGTAAGGTACCCACCATACACAACTACAAAGCAAAGATTGCTAAAAGCTCTTATTGGCGGTGGCATACTTGGTATTATTCGTGCCCTGTTTGGTTGGTCCTAG 1482 0.4487 MSFQDSDKTKSEASAFDAPAASRLVTELRGAFASGKPSSYEWRVSQVKALAKLVADHEQEIVDALQKDLAKPPLETVAYEIAMLKNSCKVALKELKHWITPEKVKTSLASFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGDYMDKSCIRVVEGAVDETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGCNNGQACISPDYVITTKEYAAKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFNRLKKLLDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMSEEIFGPLLPILTVDKLEESFQVINSGPKPLAAYIFTNNKKLKELFVMNISAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFIGDASVRYPPYTTTKQRLLKALIGGGILGIIRALFGWS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0747 493 SUPERFAMILY ALDH-like 23 463 IPR016161 GO:0016491
Pvu1g0747 493 Coils Coil 47 67 - -
Pvu1g0747 493 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 226 233 IPR029510 GO:0016491
Pvu1g0747 493 Pfam Aldehyde dehydrogenase family 13 450 IPR015590 GO:0016491
Pvu1g0747 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 448 IPR016162 GO:0016491
Pvu1g0747 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 230 430 IPR016163 GO:0016620
Pvu1g0747 493 PANTHER ALDEHYDE DEHYDROGENASE 10 493 IPR012394 GO:0006081
Pvu1g0747 493 PIRSF ALDH 5 483 IPR012394 GO:0006081
Pvu1g0747 493 PANTHER ALDEHYDE DEHYDROGENASE 10 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0747 Pvu-Chr1 9737465 9743912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0747 81 491 Aldehyde Dehydrogenase Gene Family AT1G44170 75.669 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0747 K00128 - gmx:100778722 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0747 1 9737465 9743912 Pvu1g0747 1 9737465 9743912 ECH