Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0743 ATGACCGCACCGCAACTTGACTTTCCCCCGGGATTCAGATTCCACCCCACAGACGAAGAACTCGTCGTTCATTACCTCTGCCGGAAATGCGTCAACCAACAAATCACCGTTCCCATAATCGCCGAAATCGACCTCTACAAATACGACCCTTGGAATCTCCCAGGAATGGCGTTGTACGGAGAGAAAGAGTGGTATTTCTTCACGCCGAGGGAGCGGAAGTACCCGAACGGTTCGAGGCCGAATCGGTCCGCGGGAACCGGGTACTGGAAAGCAACTGGAGCAGATAAACCGATTGGTAAACCGAAACCGGTTGGGATAAAAAAGGCGTTGGTGTTTTACGCTGGAAAAGCGCCCAAGGGAGAGAAAACAAACTGGATCATGCACGAGTATCGTCTCGCAGACGTGGATCGTTCCGTTCGCAGAAAAAACAGCTTGAGGCTGGATGACTGGGTGCTGTGTCGCATATACAACAAGAAAGGCGCGGCGGTTCAGAAGCAACCACCGCTCAAAATTGAGTGCTTCGAATTGGAGGACAAGAAGCCGCCGATTGCGCAACCCTACGCGGAGGCCACAGAGGCGGACTGCATGTACTTCGAGGCGTCGGACTCGGTGCCGCGACTGCTGACCACGGACTCCAGCTGCTCGGAGCAGGTGGTGTCGCCGGAGCTGGCGAGCGAGGTGCAGAGCGAGCCCAAGAGGAGAAACAGCGAGTTTACGTACAATTACGTGGATGCCACTCTGGCGTCGGAGTTCCATAGCGCGAATCAGATGTCGCCGCTGCAGGATATCTTCATGTACCTCTCCAAACCGATGTGA 816 0.549 MTAPQLDFPPGFRFHPTDEELVVHYLCRKCVNQQITVPIIAEIDLYKYDPWNLPGMALYGEKEWYFFTPRERKYPNGSRPNRSAGTGYWKATGADKPIGKPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRRKNSLRLDDWVLCRIYNKKGAAVQKQPPLKIECFELEDKKPPIAQPYAEATEADCMYFEASDSVPRLLTTDSSCSEQVVSPELASEVQSEPKRRNSEFTYNYVDATLASEFHSANQMSPLQDIFMYLSKPM* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0743 271 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 1 255 - -
Pvu1g0743 271 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Pvu1g0743 271 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Pvu1g0743 271 PANTHER NAC TRANSCRIPTION FACTOR 56 1 255 - -
Pvu1g0743 271 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Pvu1g0743 271 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0743 Pvu-Chr1 9645823 9647539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0743 6 270 NAC Transcription Factor Family AT1G01720 69.718 2.48e-141 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu1g0743 NAM 3.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0743 - - pvu:PHAVU_001G072200g 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1245 9 18016424 18020824 Pvu1g0743 1 9645823 9647539 PCT