Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0737 ATGTCGACGCAGAATCGTCGCTCGTCGTTTTCCTCCTATACGGCGTCGTCTTTGGCCAAACGAAATTCAGCCGTCGTGTCGTCCGGGAAGGCTGCTAAGAGAGCGCCGCTCGCCAACATCACCAACCAGAGGAATGCGCCTTCCTCTTCTTCAGTTTCAAGTTCAACTAAAGCTTCCAAGACCAAGAAGGAGGCTCCAGCAATAAGCAGTAGCATCACAAGATCAACAATTTGTGGGAACAACTTACGTGAGTTAAAGACTATTAACTCAAGTACAACTATTTTTCCAAAGGCTAATTGTTTACCACGAAGGAAGGATGCTGCTCCCACAGTTGCCAGAGTCTATGTGCCGGTTCAGAGCACCTTTGATGTTTCTCCTAGTAAATCAGATGCGAGGGATGTCTCAGCTTTTGATTCAATTCAGAGAAAGACAAGCAATTTGAGCGTTTGTGATACCTCCAAGACAGAAGGTAACACATATAGTAGGGAAATAGTTGTTGATTTGGAAAGAGAGGGCAAGGTTGTCAATATTGACAACATTTACTCGGATCCGCAGCTTTGTGCAACGTATGCTTGTGATATCTACAAGAACCTTCGTGAATCTGAGGAAAAGAAAAGGCCTTCTAGTGACTTCATGGAGAGAATTCAGAATGACATAAATGTTAGCATGCGTGCAATATTGATTGACTGGCTTGTTGAGGTGGCTGAGGAGTATCGCCTTGTACCTGATACATTGTATTTGACAGTGAACTACGTTGATCGGTATCTTTCAGGGAAGGCCATGAATAGACAAAGATTGCAATTACTTGGTGTTTCCTGTATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCACAGGTGGAGGATTTTTGTTATATAACTGATAATACGTACTTAAAAGAAGAGCTTTTACGAATGGAATCTGCTGTTTTGAATTATCTGAAGTTCGAAATGACAGCCCCAACAGTTAAATGTTTCTTAAGACGATTTGTTCATGTAGCAGCTCATGATGTCCAAGAGGTACCTTCACTTCAACTAGAGTGCCTAACCAACTTTATTGCCGAATTGTCGCTCTTGGAGTACAGCATGCTGTGTTATCCTCCATCACTGATAGCTGCTTCAGCAACTTTCCTTGCCAGATTTATACTTTTCCCTTCAAAGAAACCATGGAATTCCATATTGCAGCATTACGCACAATACCGGCCTTCTGATTTGTGTGCTTGTGTGAAAGATCTCCATCGCCTTTGTTGCAGCAGTAGCGATACTTCCAATTTACCCGCTATCCGAGAGAAATACAGTCAGCACAAGTACAAATGTGTGGCCAAGAAGTACATCCCTCTCTCAATACCGCAAGAAGTTTTCCGGAATTGA 1374 0.4279 MSTQNRRSSFSSYTASSLAKRNSAVVSSGKAAKRAPLANITNQRNAPSSSSVSSSTKASKTKKEAPAISSSITRSTICGNNLRELKTINSSTTIFPKANCLPRRKDAAPTVARVYVPVQSTFDVSPSKSDARDVSAFDSIQRKTSNLSVCDTSKTEGNTYSREIVVDLEREGKVVNIDNIYSDPQLCATYACDIYKNLRESEEKKRPSSDFMERIQNDINVSMRAILIDWLVEVAEEYRLVPDTLYLTVNYVDRYLSGKAMNRQRLQLLGVSCMMIASKYEEICAPQVEDFCYITDNTYLKEELLRMESAVLNYLKFEMTAPTVKCFLRRFVHVAAHDVQEVPSLQLECLTNFIAELSLLEYSMLCYPPSLIAASATFLARFILFPSKKPWNSILQHYAQYRPSDLCACVKDLHRLCCSSSDTSNLPAIREKYSQHKYKCVAKKYIPLSIPQEVFRN* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0737 457 Pfam Cyclin, C-terminal domain 322 443 IPR004367 -
Pvu1g0737 457 SUPERFAMILY Cyclin-like 182 319 IPR036915 -
Pvu1g0737 457 MobiDBLite consensus disorder prediction 38 70 - -
Pvu1g0737 457 CDD CYCLIN 320 414 IPR013763 -
Pvu1g0737 457 ProSitePatterns Cyclins signature. 224 255 IPR006671 -
Pvu1g0737 457 CDD CYCLIN 223 312 IPR013763 -
Pvu1g0737 457 Gene3D - 193 443 - -
Pvu1g0737 457 MobiDBLite consensus disorder prediction 1 70 - -
Pvu1g0737 457 PANTHER CYCLIN-A1-1 128 456 - -
Pvu1g0737 457 PIRSF Cyclin_A_B_D_E 1 453 IPR039361 -
Pvu1g0737 457 PANTHER CYCLINS 128 456 IPR039361 -
Pvu1g0737 457 SUPERFAMILY Cyclin-like 322 447 IPR036915 -
Pvu1g0737 457 MobiDBLite consensus disorder prediction 1 24 - -
Pvu1g0737 457 Pfam Cyclin, N-terminal domain 193 319 IPR006671 -
Pvu1g0737 457 SMART Cyclin_C_2 322 447 IPR004367 -
Pvu1g0737 457 SMART cyclin_7 326 415 IPR013763 -
Pvu1g0737 457 SMART cyclin_7 229 313 IPR013763 -
Pvu1g0737 457 Gene3D - 207 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0737 Pvu-Chr1 9530945 9534936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0737 4 457 Core Cell Cycle Gene Families AT1G44110 56.576 4.50e-170 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0737 K06627 - gmx:100776207 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0737 1 9530945 9534936 Pvu1g0737 1 9530945 9534936 ECH
Pvu1g0737 1 9530945 9534936 Pvu9g1325 9 18952118 18955751 PCT