Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0735 ATGGATAAGCAAGTGATGCTATTCCTTCCTCATTTGCTGTTCCTCTTCACCATGTTGACACATGAAGCAGCATCTTCCACATGTCCCATGGATCTCTCTTACGTTGGTTCCATTCCCTGGAACACTGAGATCTGCAAAGACCCTATTGACAAGGATCACTGTTGCGACACACTATTGAGTGTCTTTGCCATTGCCCTCGCTGAGCGCCTCAAAGATACTCACATATTTTACCTTCCCGATGCAAACACTTCCTCCACTTGCTTACATGACTTCACACTCAGGCTTTCAGCCTTGTCCATCAACCAAAACATGGTCCCTCTTTGCTTCCCTAACCCAACACGCTTTGTTTTCAACTCTTCGGCTTGTGCAGGTATCAGAACCATCCAAGATTGGATTAACAAGGTGGGCCCAGATACCCCTTTGAACTCAACTTGCAATAGGGACCTCAAAGACAATACTCGCTGCAGACTTTGCTCTGATGCTGCCTCCACACTCAATTCCACGCTCTCAACTATTTACCCAGATGCTGACCCCACAAAGTGTTTTTACTACATAGTGTTGTATGCTGCAGCTGCTGTTAACCCGTACGGTACAACCGATTTAAGCACCACGAGTTGCATACTGGACCTGGAGCATAGTGTTGTAATACAAGGGTCAAGTCATAGAGAAAAAGTGTGGAAGCTGGGTTTTGCGTTGTTGGGTGCTGTTATTGGTGTTGTGCTTGCTTTTGTTATGATAGTTGCGTACAGGAAGTGGGATAAGAGAAGGAGGCAGAGTGTTTATCACAGGGAGATTGAGAACAAGGTCAGGGCATGTGTTTTGCCTAATGCTGGTGTAAAATGGTTTCACGTAGCGGAGCTTGAGCGTGCCACTGAGCGATTTTCAAGGACGAATGTGGTTGGTCAAGGTGGTCATGGAGTTGTGTATAAAGGTACTCTTTCTGATGGTGCTGTGGTTGCTGTTAAGGACATTTTTTATTTGGAGGGTAAAGGAGATGAAGAGTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTGCTCTTCGGGGCTGTTGCATTTCAAGTGATGATTTGGAAGGTAAGAGGAGGTTTTTGGTTTATGATTTTATGCCTAATGGAAGTCTCAGTGACCAATTGTGTTCTGATGGTGCTAACAGGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCTCCAATTTATCATCGTGACATAAAGGCTACCAACATACTTTTGGACTCTAAAATGAATGCTAAATTGGCTGATTTTGGGTTGGCCATGCAAGGTTGTGAGGATCAGTCTCATCTCACCACAAGGGTGGCTGGCACATATGGTTATGTAGCACCAGAGTATGCTCTGTATGGACAGCTAACTGAGAAAACTGATGTCTATAGTTTCGGTATTGTTATTCTTGAAATCATGAGTGGAAGGAAAGTGCTTGATACTTTGGATTCATCTGCTGGTTCAATTACGGATTGGGCATGGACAATGACAGAATCTGGAAAGATTGAGGAAGTTTTTGATGAGTCAATAAGAGAAGGGCAAGAAAAAATTATGGAAAGGTTTGTTCATGTTGGAATGCTATGTGCTCATGTGGCAGTGGCGTTAAGGCCTACTATTGTTGAGGCCCTCAAGATGTTAGAAGGTGCCATTGACATTCCCCAATTACCTGACAGACCAGTGCCACTGGGTCATGAGTCCTTCCAATCTTCTTTGTTGCATGGTTTACCCAGAAGTGGTTGA 1800 0.4394 MDKQVMLFLPHLLFLFTMLTHEAASSTCPMDLSYVGSIPWNTEICKDPIDKDHCCDTLLSVFAIALAERLKDTHIFYLPDANTSSTCLHDFTLRLSALSINQNMVPLCFPNPTRFVFNSSACAGIRTIQDWINKVGPDTPLNSTCNRDLKDNTRCRLCSDAASTLNSTLSTIYPDADPTKCFYYIVLYAAAAVNPYGTTDLSTTSCILDLEHSVVIQGSSHREKVWKLGFALLGAVIGVVLAFVMIVAYRKWDKRRRQSVYHREIENKVRACVLPNAGVKWFHVAELERATERFSRTNVVGQGGHGVVYKGTLSDGAVVAVKDIFYLEGKGDEEFCYEVEIISKIKHRNLLALRGCCISSDDLEGKRRFLVYDFMPNGSLSDQLCSDGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMNAKLADFGLAMQGCEDQSHLTTRVAGTYGYVAPEYALYGQLTEKTDVYSFGIVILEIMSGRKVLDTLDSSAGSITDWAWTMTESGKIEEVFDESIREGQEKIMERFVHVGMLCAHVAVALRPTIVEALKMLEGAIDIPQLPDRPVPLGHESFQSSLLHGLPRSG* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0735 599 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 12 592 - -
Pvu1g0735 599 SUPERFAMILY Protein kinase-like (PK-like) 276 567 IPR011009 -
Pvu1g0735 599 Pfam Protein kinase domain 296 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0735 599 Gene3D Transferase(Phosphotransferase) domain 1 375 574 - -
Pvu1g0735 599 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Pvu1g0735 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Pvu1g0735 599 ProSiteProfiles Protein kinase domain profile. 294 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0735 599 Gene3D Phosphorylase Kinase; domain 1 254 374 - -
Pvu1g0735 599 Pfam SPARK 23 172 IPR043891 -
Pvu1g0735 599 SMART serkin_6 294 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0735 599 CDD STKc_IRAK 309 568 - -
Pvu1g0735 599 PANTHER OS01G0253100 PROTEIN 12 592 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0735 Pvu-Chr1 9478510 9482151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0735 22 588 Receptor kinase-like Gene Family AT1G11050 49.915 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pvu1g0735 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0735 - - gmx:100800481 907.516