Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0734 ATGATTCTTACCTTCATGTTGCTCTTCACCATTCTCATAGCTGCTGCATCTTCTTCATGCCCCATGGATCTCACCTATGTTCAGACCATTCCCTGGAACACTTCAATCTGCAAAGACCCTATTAACAAAAGTCCCTGCTGCCTAACACTCTCCAGCATCTTCGGCATAGGCCTTGCTGAACATCTCAAACAAACATCCATATTTTACCTTCCTGATGTAAACACTTCCTCCGCTTGCTTATCTGATTTCAAAGACCACCTTGCAGCCATCTCAGTAAAACCAACCATAGTCCCTCTTTGTTTCCCTCACCCAACCCAATTTGTCACTAACTCTTCAGCTTGTGCAGGGATTAGAACTCTACAAGATTGGAACCAAAAGGTGGGCATGGATAGCCCTGTCAAAACATCATGCAAAGGGGACCTAAAGGACCAAAATCTCTGCAGAATTTGCTCAGACGTTGCTATAGAATTGAAGTCCAATCTGACACTTATTGACCCAAATGCTAATGCTGTCGAATGTTTTTACTACATAGTTTTATATGCTGCAGCTGTCGCTAATCCGTTTGGTACAACAGATCTAAGCACTACTGGATGCATATTTAACCTGCCAGAACCATCTAATGTAGTAACAAGAGGGTCATCAAACAAAAGAAGGAAAGTGATCATGCTTGTTTTTACGTTGTTGGGTGTTGTTATTAGTGTTGTGCTTGCTTTTGCTCTGATGGTCGTGTACAGGAAGTGGGATAAGAGAAGGAAGGAAAATGTTCATCGCAGGGAAGTTGAAAACGAGGTTAGGGCTGGTGTTTTGCCTGGCACAGGTGCTAAATGGCTGCACATATCAGAGCTTGAACGTGCCACGAGTAAATTTTCAGAGAGTAATGTGATTGGGAAAGGTGGTGATGGGGTGGTGTACAAAGGGACTCTTTCAGATGGCACTGTGGTTGGTGTTAAGGAAATTTTAGATTTGGAAACTAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTGCTCTTCGGGGTTGTTGTGTTACAAGTGATAATTTGAAAGGTAAGAGGAGGTTTTTGATTTATGAGTTTATGCCTAATGGCAGCCTGAGTGACAGATTGTGTTGTGATGGTGCTAATAAGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCATCGTGACATAAAAGCTACCAACATACTTTTGGATTCCAAAATGCATGCTAAATTGGCAGATTTTGGGTTGGCCAAGCAGGGTAATGATGGCCAATCTCATCTCACTACAGGGGTTGTTGGCACATATGGTTATGTAGCACCAGAATATGCGTTATATGGGCAACTAAGTGAGAAAAGTGATGTGTACAGTTTCGGTATTGTGATTCTAGAAATCATGAGTGGAAGAAAAGTGCTTGATAGTTTGAATTCATCCACGGATTCATTTACAGATTGGGTATGGGCACTTGCAGAATCTGGAAAGATGGAGGAAATTTTAGAGGAATCAGTAAGAGAAGGGTCAGTAAAAATTATGGAAAGGTTTGTTCATGTTGGAATGCTATGTGCTCATTTTGTAGTGGCGTTAAGACCTACTATTGTTGAGGCCCTTAAGATGTTAGAAGGTGACATTGACATTCCCAAATTACCTGACAGACCAGTGCCACTAGGTCATGCGTCATTTCAATCTTCTCTGTTGCATGGTTTGCAGAGAAGTGGTTGA 1785 0.4168 MILTFMLLFTILIAAASSSCPMDLTYVQTIPWNTSICKDPINKSPCCLTLSSIFGIGLAEHLKQTSIFYLPDVNTSSACLSDFKDHLAAISVKPTIVPLCFPHPTQFVTNSSACAGIRTLQDWNQKVGMDSPVKTSCKGDLKDQNLCRICSDVAIELKSNLTLIDPNANAVECFYYIVLYAAAVANPFGTTDLSTTGCIFNLPEPSNVVTRGSSNKRRKVIMLVFTLLGVVISVVLAFALMVVYRKWDKRRKENVHRREVENEVRAGVLPGTGAKWLHISELERATSKFSESNVIGKGGDGVVYKGTLSDGTVVGVKEILDLETKGDEEFCYEVEIISKIKHRNLLALRGCCVTSDNLKGKRRFLIYEFMPNGSLSDRLCCDGANKLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMHAKLADFGLAKQGNDGQSHLTTGVVGTYGYVAPEYALYGQLSEKSDVYSFGIVILEIMSGRKVLDSLNSSTDSFTDWVWALAESGKMEEILEESVREGSVKIMERFVHVGMLCAHFVVALRPTIVEALKMLEGDIDIPKLPDRPVPLGHASFQSSLLHGLQRSG* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0734 594 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 16 588 - -
Pvu1g0734 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Pvu1g0734 594 CDD STKc_IRAK 295 563 - -
Pvu1g0734 594 SUPERFAMILY Protein kinase-like (PK-like) 273 562 IPR011009 -
Pvu1g0734 594 SMART serkin_6 289 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0734 594 Pfam SPARK 16 168 IPR043891 -
Pvu1g0734 594 Pfam Protein kinase domain 290 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0734 594 ProSiteProfiles Protein kinase domain profile. 289 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0734 594 Gene3D Phosphorylase Kinase; domain 1 248 369 - -
Pvu1g0734 594 Gene3D Transferase(Phosphotransferase) domain 1 370 567 - -
Pvu1g0734 594 PANTHER OS01G0253100 PROTEIN 16 588 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0734 Pvu-Chr1 9469086 9470870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0734 15 591 Receptor kinase-like Gene Family AT1G11050 47.761 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pvu1g0734 Pkinase 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0734 - - vra:106763645 944.11