Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu1g0734 | ATGATTCTTACCTTCATGTTGCTCTTCACCATTCTCATAGCTGCTGCATCTTCTTCATGCCCCATGGATCTCACCTATGTTCAGACCATTCCCTGGAACACTTCAATCTGCAAAGACCCTATTAACAAAAGTCCCTGCTGCCTAACACTCTCCAGCATCTTCGGCATAGGCCTTGCTGAACATCTCAAACAAACATCCATATTTTACCTTCCTGATGTAAACACTTCCTCCGCTTGCTTATCTGATTTCAAAGACCACCTTGCAGCCATCTCAGTAAAACCAACCATAGTCCCTCTTTGTTTCCCTCACCCAACCCAATTTGTCACTAACTCTTCAGCTTGTGCAGGGATTAGAACTCTACAAGATTGGAACCAAAAGGTGGGCATGGATAGCCCTGTCAAAACATCATGCAAAGGGGACCTAAAGGACCAAAATCTCTGCAGAATTTGCTCAGACGTTGCTATAGAATTGAAGTCCAATCTGACACTTATTGACCCAAATGCTAATGCTGTCGAATGTTTTTACTACATAGTTTTATATGCTGCAGCTGTCGCTAATCCGTTTGGTACAACAGATCTAAGCACTACTGGATGCATATTTAACCTGCCAGAACCATCTAATGTAGTAACAAGAGGGTCATCAAACAAAAGAAGGAAAGTGATCATGCTTGTTTTTACGTTGTTGGGTGTTGTTATTAGTGTTGTGCTTGCTTTTGCTCTGATGGTCGTGTACAGGAAGTGGGATAAGAGAAGGAAGGAAAATGTTCATCGCAGGGAAGTTGAAAACGAGGTTAGGGCTGGTGTTTTGCCTGGCACAGGTGCTAAATGGCTGCACATATCAGAGCTTGAACGTGCCACGAGTAAATTTTCAGAGAGTAATGTGATTGGGAAAGGTGGTGATGGGGTGGTGTACAAAGGGACTCTTTCAGATGGCACTGTGGTTGGTGTTAAGGAAATTTTAGATTTGGAAACTAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTGCTCTTCGGGGTTGTTGTGTTACAAGTGATAATTTGAAAGGTAAGAGGAGGTTTTTGATTTATGAGTTTATGCCTAATGGCAGCCTGAGTGACAGATTGTGTTGTGATGGTGCTAATAAGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCATCGTGACATAAAAGCTACCAACATACTTTTGGATTCCAAAATGCATGCTAAATTGGCAGATTTTGGGTTGGCCAAGCAGGGTAATGATGGCCAATCTCATCTCACTACAGGGGTTGTTGGCACATATGGTTATGTAGCACCAGAATATGCGTTATATGGGCAACTAAGTGAGAAAAGTGATGTGTACAGTTTCGGTATTGTGATTCTAGAAATCATGAGTGGAAGAAAAGTGCTTGATAGTTTGAATTCATCCACGGATTCATTTACAGATTGGGTATGGGCACTTGCAGAATCTGGAAAGATGGAGGAAATTTTAGAGGAATCAGTAAGAGAAGGGTCAGTAAAAATTATGGAAAGGTTTGTTCATGTTGGAATGCTATGTGCTCATTTTGTAGTGGCGTTAAGACCTACTATTGTTGAGGCCCTTAAGATGTTAGAAGGTGACATTGACATTCCCAAATTACCTGACAGACCAGTGCCACTAGGTCATGCGTCATTTCAATCTTCTCTGTTGCATGGTTTGCAGAGAAGTGGTTGA | 1785 | 0.4168 | MILTFMLLFTILIAAASSSCPMDLTYVQTIPWNTSICKDPINKSPCCLTLSSIFGIGLAEHLKQTSIFYLPDVNTSSACLSDFKDHLAAISVKPTIVPLCFPHPTQFVTNSSACAGIRTLQDWNQKVGMDSPVKTSCKGDLKDQNLCRICSDVAIELKSNLTLIDPNANAVECFYYIVLYAAAVANPFGTTDLSTTGCIFNLPEPSNVVTRGSSNKRRKVIMLVFTLLGVVISVVLAFALMVVYRKWDKRRKENVHRREVENEVRAGVLPGTGAKWLHISELERATSKFSESNVIGKGGDGVVYKGTLSDGTVVGVKEILDLETKGDEEFCYEVEIISKIKHRNLLALRGCCVTSDNLKGKRRFLIYEFMPNGSLSDRLCCDGANKLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMHAKLADFGLAKQGNDGQSHLTTGVVGTYGYVAPEYALYGQLSEKSDVYSFGIVILEIMSGRKVLDSLNSSTDSFTDWVWALAESGKMEEILEESVREGSVKIMERFVHVGMLCAHFVVALRPTIVEALKMLEGDIDIPKLPDRPVPLGHASFQSSLLHGLQRSG* | 595 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu1g0734 | 594 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE-RELATED | 16 | 588 | - | - | |
Pvu1g0734 | 594 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 414 | 426 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu1g0734 | 594 | CDD | STKc_IRAK | 295 | 563 | - | - | |
Pvu1g0734 | 594 | SUPERFAMILY | Protein kinase-like (PK-like) | 273 | 562 | IPR011009 | - | |
Pvu1g0734 | 594 | SMART | serkin_6 | 289 | 561 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0734 | 594 | Pfam | SPARK | 16 | 168 | IPR043891 | - | |
Pvu1g0734 | 594 | Pfam | Protein kinase domain | 290 | 506 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0734 | 594 | ProSiteProfiles | Protein kinase domain profile. | 289 | 570 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0734 | 594 | Gene3D | Phosphorylase Kinase; domain 1 | 248 | 369 | - | - | |
Pvu1g0734 | 594 | Gene3D | Transferase(Phosphotransferase) domain 1 | 370 | 567 | - | - | |
Pvu1g0734 | 594 | PANTHER | OS01G0253100 PROTEIN | 16 | 588 | IPR045271 | GO:0004714|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu1g0734 | Pvu-Chr1 | 9469086 | 9470870 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu1g0734 | 15 | 591 | Receptor kinase-like Gene Family | AT1G11050 | 47.761 | 0.0 | 539 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RKF3 | Pvu1g0734 | Pkinase | 4e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu1g0734 | - | - | vra:106763645 | 944.11 |