Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0732 ATGGTCACAAAATCAAATGTTTCAAGTTTGTGTCTGCACCTGAAAATGGATAAGCAAGGAGTTCTCCTTTCTCTCCTAATTTTCATCTTCACTGTTTCTATAGCTGGTGCTGCATCTACCACATGTCCCATGGATCTCAGCTATGTTGAGACCTTTCCATGGGATACTTCATCCTGCAGAGACCCTGTTGATAAGGAGCACTGTTGCCAAGCTCTGCTCAGTGTAATTGGCCTGGGGATGTCCCAACACCTCAAAGACACTTCCTTGTTTCAACTTCCGGATGAAAACACTTCCTCCCTTTGCTTATCCAATTTCCAGACCAAACTCTCAGCCTTGTCAATTAACTCCTCTTTGGTCCCTCATTGTTTTCCTAGAGCTTCCGAGTTTGTTACTAACACTTCAACTTGCGCAGGAATTATAACTATCGATGATTGGAAGCAAAAAGTGGGCATGATTAGCCCTTTAGACACTTCTTGTAATGGGGACCTGAGTGATCAAACTCGTTGCAGCATTTGTACTGATGCTGGCCTCAAAGTGACTTCCCAACTCAATAGTTTGGACCCAAATGCCACAAAGTGCTTTTACTTCACAGTTTTGTATGCCTCAGCTATAGTTAACCAGTTTGGTCCAACAAATTTGGGCACAGCTGGTTGCGTACTAGGCATGCCGCTGTCTGTAAAAGGGTCATCGAATAAAAAAGAAGTGCTGAAAATTGTTTTTGGGTTGGTGGGTGCTGTTACTGGTGTTGTGCTGGGGTTTGTGTTGATTGTGATATACAGGAAGTGGGATAAGAGAAGGAAGGAAGATAGGTATCACAGGTCGGTTGAAAACGGTGTGAGGAACAGTGTTTTGCCTAATACTGGTGCCAAATGGTTTCACATATCGGAGCTTGAGCGAGCGACTAATAAATTTTCTCAGAGGAATATGCTTGGTCAAGGTGGTGATGGGGTTGTGTACAAAGGGACTCTTTCAGACGGCACTGTGGTTGCGGTGAAGGAAATTTTTGATTTGGAGACGAAAGGGGATGAAGATTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTGCTCTTCGGGGTTGTTGCATTTCTAGTGATAGTTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTTCATGACTAATGGAAGCCTGAGTTACCAATTGTCAGTTGCTGGGGCTAATAGGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAGATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACCAACATACTTTTGGATTCAAAAATGAAAGCCAAAGTTTCAGATTTCGGGTTGGCCAAGCAAGGGAATGATGGCCAGTCTCATCTCACTACAAGGGTTGCTGGCACATATGGTTATTTGGCACCAGAGTATGCTCTTTATGGGCAACTAACAGAGAAGAGTGATGTGTACAGTTTTGGCATTGTGATTCTTGAGATGATGAGTGGAAGAAAAGTGCTTGATACCATGAATTCATCGGTTGTCTTAATCACGGATTGGGCATGGACACTGGCAAAATCAGGGAACACACAGGACATTTTTGATCAGTCAATAAGAGAAGAGGGGCCAGAGAAGATCATGGAAAGGTTTGTTCTTGTGGGAATTCTGTGTGCTCATGCAATGGTGGCTTTAAGGCCTACTATTGCTGAGGCCCTTAAGATGTTAGAGGGTGACATTGACATACCCCAATTACCTGACAGACCAGTACCACTGGGCCATGAGACCTTCCAATCTTCTTTGTTGCATGGTTTGCAAAGTAGTGGAAGATCATCCGCATACTTTTCATCATACCTTGCATCTTATTCAACAAATACTAGAACAACATAG 1893 0.4311 MVTKSNVSSLCLHLKMDKQGVLLSLLIFIFTVSIAGAASTTCPMDLSYVETFPWDTSSCRDPVDKEHCCQALLSVIGLGMSQHLKDTSLFQLPDENTSSLCLSNFQTKLSALSINSSLVPHCFPRASEFVTNTSTCAGIITIDDWKQKVGMISPLDTSCNGDLSDQTRCSICTDAGLKVTSQLNSLDPNATKCFYFTVLYASAIVNQFGPTNLGTAGCVLGMPLSVKGSSNKKEVLKIVFGLVGAVTGVVLGFVLIVIYRKWDKRRKEDRYHRSVENGVRNSVLPNTGAKWFHISELERATNKFSQRNMLGQGGDGVVYKGTLSDGTVVAVKEIFDLETKGDEDFCYEVEIISKIKHRNLLALRGCCISSDSLKGKRRFLVYDFMTNGSLSYQLSVAGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVSDFGLAKQGNDGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEMMSGRKVLDTMNSSVVLITDWAWTLAKSGNTQDIFDQSIREEGPEKIMERFVLVGILCAHAMVALRPTIAEALKMLEGDIDIPQLPDRPVPLGHETFQSSLLHGLQSSGRSSAYFSSYLASYSTNTRTT* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0732 630 CDD STKc_IRAK 310 579 - -
Pvu1g0732 630 Gene3D Transferase(Phosphotransferase) domain 1 385 583 - -
Pvu1g0732 630 ProSiteProfiles Protein kinase domain profile. 304 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0732 630 SUPERFAMILY Protein kinase-like (PK-like) 289 593 IPR011009 -
Pvu1g0732 630 PANTHER OS01G0253100 PROTEIN 25 607 IPR045271 GO:0004714|GO:0006468
Pvu1g0732 630 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 25 607 - -
Pvu1g0732 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Pvu1g0732 630 Pfam Protein kinase domain 306 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0732 630 SMART serkin_6 304 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0732 630 Pfam SPARK 38 193 IPR043891 -
Pvu1g0732 630 Gene3D Phosphorylase Kinase; domain 1 265 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0732 Pvu-Chr1 9426985 9429335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0732 31 607 Receptor kinase-like Gene Family AT1G11050 51.736 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pvu1g0732 Pkinase 6.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0732 - - gmx:100820563 1048.88