Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0723 ATGACTCTTGAGTCTCTTGTTCACCATCTGAAAGAGATTCAAAACAATTTGCAAGGATTGTTTTTAACAATAACTGGACCAAACCAAAATCTTGAACATTACCGTGTATATCAATCAGTATTTATTACGTTGGGACACTATGTTGTACCATACTTCAGATATGTTGTTGGCACTATATTATTTATTGCTCTTTTGACATACAAGTGGAGAAGAAGACATTCGTCACAATACGAAAATATTGAAAGTTATTTAGAGCAAAATAGTTTGATGCCTATTCGATACACATACAAGGAAATTAAGAAGATGGCTACAGGTTTCAATGAAAAATTGGGTGAAGGAGGTTATGGTTCTGTATTCAAGGGAAAGTTGTGTAGTGGATCTTGTGTTGCTATAAAAATATTACGAAAATCAAAAGGTAATGGACAAGACTTTATCAATGAAGTTGCAACAATTGGAACAATACATCATCAAAATGTAGTGCAGTTAATTGGATATTGTGCTGAGGGTTCAAAACATGCTCTTGTTTATGAGTTCATGCCTAATGGATCTCTTGACAAATTTATATTTTCCAGAGAAGAGAATTTGCATTTAACCTATGACACAATATACAATATAGCAATTGGAATAGCACATGGGATTTCGTATCTACACCATGGCTGTGAGATGCAAATTTTGCATTTTGACATCAAACCCCACAACATCCTGCTTGATGAAAAATTCACCCCAAAAGTCTCTGACTTCGGATTGGCAAAACTATATCCAATAGATAAGAGTGTTGTGACTATGACAGCAGCAAGAGGGACAATTGGATACATGGCTCCAGAATTGTTTTATACAAATATTGGAAGAATATCAGATAAGTCTGATGTTTATAGTTTTGGAATGCTTCTGATGGAGATAGCAAGTAAGAGGAAAAACTTAAACCCCAATGCAGAGCGTTCAAGCCAACTTTATTTTCCCTTTTGGATTTATGATCAACTTGACAAAGAGAAAGATATAGAAATGGAAGATGTCATAGAGGAAGAGAAGAAAATTGCAAAAAAAATGATGATAATTTCACTTTGGTGCATACAGTTAAAACCAAATGATCGTCCTTCCATTAATAAAGTAGTCGAAATGCTTGAAGGAGACATTGAGAACCTTAAAATACCTCCAAAACCTTCTCTATATCCACATGAAACATTGGAAAGAATTTGCTCTAACCAAACAACATTGTCTGAGTTCATTAGTTCTTCAAGCAATTCCATGAAGATTGTCACTAATGCTCCACTAGATGAAAGTATTTGA 1287 0.3427 MTLESLVHHLKEIQNNLQGLFLTITGPNQNLEHYRVYQSVFITLGHYVVPYFRYVVGTILFIALLTYKWRRRHSSQYENIESYLEQNSLMPIRYTYKEIKKMATGFNEKLGEGGYGSVFKGKLCSGSCVAIKILRKSKGNGQDFINEVATIGTIHHQNVVQLIGYCAEGSKHALVYEFMPNGSLDKFIFSREENLHLTYDTIYNIAIGIAHGISYLHHGCEMQILHFDIKPHNILLDEKFTPKVSDFGLAKLYPIDKSVVTMTAARGTIGYMAPELFYTNIGRISDKSDVYSFGMLLMEIASKRKNLNPNAERSSQLYFPFWIYDQLDKEKDIEMEDVIEEEKKIAKKMMIISLWCIQLKPNDRPSINKVVEMLEGDIENLKIPPKPSLYPHETLERICSNQTTLSEFISSSSNSMKIVTNAPLDESI* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0723 428 Gene3D Transferase(Phosphotransferase) domain 1 179 383 - -
Pvu1g0723 428 ProSitePatterns Protein kinases ATP-binding region signature. 110 132 IPR017441 GO:0005524
Pvu1g0723 428 PANTHER RUST RESISTANCE KINASE LR10-RELATED 40 404 IPR045874 GO:0004672
Pvu1g0723 428 Pfam Protein tyrosine and serine/threonine kinase 106 374 IPR001245 GO:0004672|GO:0006468
Pvu1g0723 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Pvu1g0723 428 ProSiteProfiles Protein kinase domain profile. 104 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0723 428 Gene3D Phosphorylase Kinase; domain 1 77 178 - -
Pvu1g0723 428 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 40 404 - -
Pvu1g0723 428 SMART serkin_6 104 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0723 428 CDD STKc_IRAK 110 376 - -
Pvu1g0723 428 SUPERFAMILY Protein kinase-like (PK-like) 88 375 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0723 Pvu-Chr1 9269486 9273705 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0723 54 413 Receptor kinase-like Gene Family AT5G38260 46.070 8.05e-112 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0723 PK_Tyr_Ser-Thr 7.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0723 - - pvu:PHAVU_001G069200g 707.597