Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0721 ATGGCAAGTATGTTGCTCCTCCAACATGATTCTGCATTGATGACGCAATTGCTGTTGCTACTACTAATGCTTCTTCTTATCAGAACTGTCAGCAGCGCTCATAACGAGTGCGATAAGGAATTGTCTTGTGGGCCGAACCAACCCCCTATCAGATTTCCCTTCCAACTCATCAAGGAGATGGGCGAGCCATGCGGTTATCCCCGTATTTGTCTTTCTTGCACTGAAAATAATCAGACCATGCTTGCGATTCGTACGATGAAACTCCTAGTCAGTCAGATAAGCTACCGACGTCAGGTATTTAGCTTAACGGACCCCGAAAACTGCTTTTCCAACAAGTTTAACCAAACAATCAATTTTATTCGAAGTTATCAATTTGAATCACCATATGAAAGACCACACAATAACTTGAGCTTCTTCAACTGCACTTCAGCTGAGAATCCACACCTCAGACACCAATACGAGGATGGCTCAGATTCACAAGACATGGTCTCCTGTCCTATTTACATTTTTAATTCTTTTGAAAGTGTCCTCCAATTGGATCTAACATCCTGTACCAAGATGTTCGACCTCACTGCGCCAATCCCATCTTTAGAGTCGGGTATCTTGTATTTGAGATGGCCCAAACCAAATTGTGCTGAGTGCAAAGGTAAACGCAACAGATGTACATGGAAGACCAACAGCAGCACAGGAGACATCGATTGTTTTGAATGCAAACCGAAGAGAATTCACGTTCCAAAATCTTTTATTTTTGCTTCTACAGGTTCGATCCTTTTGGGGCTGGTGGTCATTGCTGTCTTCAAGAGCATCCTCTATTTTAGGAAAAAGAAAGAAGACCAAGCAAGAGTGGAAATGTTTTTAGAGGACTACAGGGCACAAAAGCCTGCAAGATTCACCTACGCTGACCTGAAAAGAATCACCAATGGCTTCAAGGAAAAGCTAGGGGAAGGAGCTCATGGAGCTGTGTTCAGAGGAAAACTTTCGAGTGAGATTCCCGTGGCTGTGAAGATCCTCAACAGTACAGAGGGAGAGGGGAACGAGTTCATCAACGAAGTCGGAATTATGGGCAAAATCCATCACATCAACATGGTGCGTTTGCTTGGCTTCTGTGCAGATGGACCCCATCGTGCTCTTGTCTACAATTTCTTTCCAAACGGTTCCTTACAAAGCTTCATATTTCCACCAGAAGACAAGGACCATTTCCTTGGATGGGAGAAGCTTCAACACGTTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGCAATCATCCCATTATTCACTTTGACATAAATCCTCACAACGTGTTACTTGATCACAACTTCACTCCAAAAATATCTGATTTTGGCTTGGCCAAACTGTGTTCCAAGAATCCCAGTTTGGTGTCCATGACAGCTGCTAGAGGAACTTTGGGATACATTGCACCTGAAGTCTTCTCCAGAAACTTTGGGAACGTGTCTTACAAGTCTGATATTTACAGTTATGGAATGTTGTTGTTAGAAATGGTTGGTGGGAGAAAGAATGTGGACATGTCTTCTCCACAAAATTTCCAAGTTCTATACCCAGATTGGATCCATAACTTGGTTGATGGAGATGTACATATCCATGTTGAGGATGAAGATGATGTTAAGATTGCAAAGAAACTAGCAATTATTGGACTTTGGTGTATTCAGTGGGAGCCAGTGAACCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTGAAGAGGAAAACCAGTTGGTTGTGCCTCCTAATCCATTTCACTCAACAACTTCCACTACAACTAAGGGACTCAGTTCCACAAGACGACCTTTGCAGTTGGAAGTAATTCAGGAATGA 1851 0.4268 MASMLLLQHDSALMTQLLLLLLMLLLIRTVSSAHNECDKELSCGPNQPPIRFPFQLIKEMGEPCGYPRICLSCTENNQTMLAIRTMKLLVSQISYRRQVFSLTDPENCFSNKFNQTINFIRSYQFESPYERPHNNLSFFNCTSAENPHLRHQYEDGSDSQDMVSCPIYIFNSFESVLQLDLTSCTKMFDLTAPIPSLESGILYLRWPKPNCAECKGKRNRCTWKTNSSTGDIDCFECKPKRIHVPKSFIFASTGSILLGLVVIAVFKSILYFRKKKEDQARVEMFLEDYRAQKPARFTYADLKRITNGFKEKLGEGAHGAVFRGKLSSEIPVAVKILNSTEGEGNEFINEVGIMGKIHHINMVRLLGFCADGPHRALVYNFFPNGSLQSFIFPPEDKDHFLGWEKLQHVALGIAKGIEYLHQGCNHPIIHFDINPHNVLLDHNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSPQNFQVLYPDWIHNLVDGDVHIHVEDEDDVKIAKKLAIIGLWCIQWEPVNRPSIKSVIHMLETEEENQLVVPPNPFHSTTSTTTKGLSSTRRPLQLEVIQE* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0721 616 Gene3D Phosphorylase Kinase; domain 1 280 381 - -
Pvu1g0721 616 Gene3D Transferase(Phosphotransferase) domain 1 382 587 - -
Pvu1g0721 616 Pfam Wall-associated receptor kinase galacturonan-binding 37 104 IPR025287 GO:0030247
Pvu1g0721 616 PANTHER RECEPTOR-LIKE KINASE 25 616 - -
Pvu1g0721 616 SUPERFAMILY Protein kinase-like (PK-like) 289 577 IPR011009 -
Pvu1g0721 616 MobiDBLite consensus disorder prediction 587 607 - -
Pvu1g0721 616 Pfam Protein tyrosine and serine/threonine kinase 309 576 IPR001245 GO:0004672|GO:0006468
Pvu1g0721 616 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Pvu1g0721 616 ProSiteProfiles Protein kinase domain profile. 307 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0721 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 25 616 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0721 Pvu-Chr1 9237903 9240134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0721 1 590 Receptor kinase-like Gene Family AT5G38260 33.758 4.76e-98 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0721 PK_Tyr_Ser-Thr 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0721 - - gmx:102662104 867.455