Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu1g0719 | TTACAAAAATCAAAAGGTAATAGACAAGACTTTATCAATGAAGTTGCAACAATTGGAAGAATACATCATCAAAATGTAGTGCACTTAATTGGATATTGTGCCGAAGGCTCAAAACTAGCCCTTGTTTATGAGTTCATGCCCAATGGATCTCTTGATAAATTTATATTTTCTAGAGAAGGAAATCTACATTTAACCTATGACACAATATATAATATAGCAATTGGAGTAGCGTGTGGGATTTCGTATTTACACCATGGTTGTGAGATGCAAATTTTGCATTTTGACATCAAACCCCACAACATCCTACTTGATGAAAAATTTACCCCAAAAATCTCTGACTTTGGATTGGCAAAACTATATCCAACAGACAAAAGTGTTGTAACTATGACAGCAGCAAGAGGGACCATTGGATACATGGCTTTGGAATTGTTTTATACAAATATAGGAAGAATATCAGATAAGTTTGATGTTTATAGTTTTGGAATGCTTCTCATGGAGATAGCAGGCAAGAGAAAAAACTTAAACCCTCATGCAAAGCGATCAAGCCAACTTTACTTTCCCTTTTGGATTTATGATCAACTTGACAAAGAGAAAGATATAAAAATGGAAGATGTTGCAGAGGATGAGAAGAAAATTGCAAAAAAGATGATTATAGTTTCACTTTGGTGTATACAATTAAAACCAAATGATCGTCCTACCATTAATAAGGTAGTCGAAATGCTTGAAGGAGACATTGAGAACCTTAAAATTCCTCCAAAACCTTCTCTGTATCCACATGAAACATTGGAAAAAATTTGCTCTGACCAAACAACATTGTGTGAGTTCATTAGTTCTTCAAGCTATTCCATGGAGATTGTCACTAATGCTTCACTAGATGAAAGTATTAGATAA | 891 | 0.3401 | LQKSKGNRQDFINEVATIGRIHHQNVVHLIGYCAEGSKLALVYEFMPNGSLDKFIFSREGNLHLTYDTIYNIAIGVACGISYLHHGCEMQILHFDIKPHNILLDEKFTPKISDFGLAKLYPTDKSVVTMTAARGTIGYMALELFYTNIGRISDKFDVYSFGMLLMEIAGKRKNLNPHAKRSSQLYFPFWIYDQLDKEKDIKMEDVAEDEKKIAKKMIIVSLWCIQLKPNDRPTINKVVEMLEGDIENLKIPPKPSLYPHETLEKICSDQTTLCEFISSSSYSMEIVTNASLDESIR* | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu1g0719 | 296 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 242 | IPR011009 | - | |
Pvu1g0719 | 296 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 1 | 272 | IPR045874 | GO:0004672 | |
Pvu1g0719 | 296 | SMART | serkin_6 | 2 | 241 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0719 | 296 | Gene3D | Transferase(Phosphotransferase) domain 1 | 50 | 250 | - | - | |
Pvu1g0719 | 296 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 49 | - | - | |
Pvu1g0719 | 296 | ProSiteProfiles | Protein kinase domain profile. | 1 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0719 | 296 | Pfam | Protein tyrosine and serine/threonine kinase | 4 | 241 | IPR001245 | GO:0004672|GO:0006468 | |
Pvu1g0719 | 296 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 91 | 103 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu1g0719 | 296 | PANTHER | STRESS-INDUCED RECEPTOR-LIKE KINASE | 1 | 272 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu1g0719 | Pvu-Chr1 | 9137482 | 9138372 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu1g0719 | 1 | 267 | Receptor kinase-like Gene Family | AT5G38260 | 50.735 | 1.13e-89 | 278 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Pvu1g0719 | PK_Tyr_Ser-Thr | 1.8e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu1g0719 | - | - | pvu:PHAVU_001G069200g | 542.347 |