Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0719 TTACAAAAATCAAAAGGTAATAGACAAGACTTTATCAATGAAGTTGCAACAATTGGAAGAATACATCATCAAAATGTAGTGCACTTAATTGGATATTGTGCCGAAGGCTCAAAACTAGCCCTTGTTTATGAGTTCATGCCCAATGGATCTCTTGATAAATTTATATTTTCTAGAGAAGGAAATCTACATTTAACCTATGACACAATATATAATATAGCAATTGGAGTAGCGTGTGGGATTTCGTATTTACACCATGGTTGTGAGATGCAAATTTTGCATTTTGACATCAAACCCCACAACATCCTACTTGATGAAAAATTTACCCCAAAAATCTCTGACTTTGGATTGGCAAAACTATATCCAACAGACAAAAGTGTTGTAACTATGACAGCAGCAAGAGGGACCATTGGATACATGGCTTTGGAATTGTTTTATACAAATATAGGAAGAATATCAGATAAGTTTGATGTTTATAGTTTTGGAATGCTTCTCATGGAGATAGCAGGCAAGAGAAAAAACTTAAACCCTCATGCAAAGCGATCAAGCCAACTTTACTTTCCCTTTTGGATTTATGATCAACTTGACAAAGAGAAAGATATAAAAATGGAAGATGTTGCAGAGGATGAGAAGAAAATTGCAAAAAAGATGATTATAGTTTCACTTTGGTGTATACAATTAAAACCAAATGATCGTCCTACCATTAATAAGGTAGTCGAAATGCTTGAAGGAGACATTGAGAACCTTAAAATTCCTCCAAAACCTTCTCTGTATCCACATGAAACATTGGAAAAAATTTGCTCTGACCAAACAACATTGTGTGAGTTCATTAGTTCTTCAAGCTATTCCATGGAGATTGTCACTAATGCTTCACTAGATGAAAGTATTAGATAA 891 0.3401 LQKSKGNRQDFINEVATIGRIHHQNVVHLIGYCAEGSKLALVYEFMPNGSLDKFIFSREGNLHLTYDTIYNIAIGVACGISYLHHGCEMQILHFDIKPHNILLDEKFTPKISDFGLAKLYPTDKSVVTMTAARGTIGYMALELFYTNIGRISDKFDVYSFGMLLMEIAGKRKNLNPHAKRSSQLYFPFWIYDQLDKEKDIKMEDVAEDEKKIAKKMIIVSLWCIQLKPNDRPTINKVVEMLEGDIENLKIPPKPSLYPHETLEKICSDQTTLCEFISSSSYSMEIVTNASLDESIR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0719 296 SUPERFAMILY Protein kinase-like (PK-like) 5 242 IPR011009 -
Pvu1g0719 296 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 272 IPR045874 GO:0004672
Pvu1g0719 296 SMART serkin_6 2 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0719 296 Gene3D Transferase(Phosphotransferase) domain 1 50 250 - -
Pvu1g0719 296 Gene3D Phosphorylase Kinase; domain 1 1 49 - -
Pvu1g0719 296 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0719 296 Pfam Protein tyrosine and serine/threonine kinase 4 241 IPR001245 GO:0004672|GO:0006468
Pvu1g0719 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Pvu1g0719 296 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0719 Pvu-Chr1 9137482 9138372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0719 1 267 Receptor kinase-like Gene Family AT5G38260 50.735 1.13e-89 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0719 PK_Tyr_Ser-Thr 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0719 - - pvu:PHAVU_001G069200g 542.347