Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0717 ATGACGCTATTGCTGTTGCTACTGCTAATGCTTCTTCTTATCACAACTGGCAGCAGCGCTCATAACGAGTGCGATGAGGAATTGTCTTGTGGGCCGAACCAACCCCCTATCAGATTTCCCTTCCAACTCATCAAGGAGATGGGCGAGCCATGCGGTTATCCCCGTATTTGTCTTTCTTGCACTGAAAATAATAAGACCATGCTTGCGCTTCCTACTATGAAACTCCTAGTCACTTACATAAACTACCGATATCAGGAAATTGGCTTAACGGACCCCGAAAACTGCTTTTCCAACAAGTTTAACCAAACCATCAATTTTATTCGAACTTACCAATTTGAATCACTACATGATGGACCACACAATAACTTGAGCTTCTTCAACTGCACTTCAGCTGAGCATTCACACCTCAGAAACTACTACGAGGATGGCTCAGATTCACAAGACATGGTCTCCTGTCCGATTTACGTTTCTAATTCTTTTGAAAGTGTCCTCCAATTGGATCTAACATCCTGTACCAAGATGTTCGACCTCACTGCGCCATTCGCATCCATCCACTGGAATGAATTGGTTTTGAGATGGTCCAAACCAAATTGTGCTGAGTGCAAAAGAAAAGGCAAGAGATGTACATGGAAGACCAACAACACCACAGGAGACATCGATTGTTTTGAATGCAAACCGAAGAGAATTCACGTTCCTAAATCTTTTATTTTTGCTTCTACAGGTTCGATCCTTTTGGGGCTGCTGGTCATTGCTGTCTTCAAGAGCATCCTTTATTTTAGGAAAAAGCAAGAAGACCAAGCAAGAGTGGACAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCTGCAAGATTCACCTACGCTGACCTTAAAAGAATCACCAATGGCTTCAAAGAAAAGCTAGGAGAAGGAGCTCATGGGGCTGTGTTCAGAGGAAAACTTTCGAGTGAGATTCCGGTGGCTGTGAAGATCCTCAACAGTACGGAGGGAGATGGGAATGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCATCACATCAACGTGGTGCGTTTGCTTGGCTTCTGTGCAGATGGACTCCATCGTGCTCTTGTCTACAATTTCTTTCCAAATGGTTCCTTACAAAGCTTCATATTTCTACCAGAAGACAAGGACCATTTCCTTGGATGGGAGAAGCTTCAACACGTTGCTCTTGGTATAGCTAAAGGGATTCAGTATCTTCATCAAGGTTGCAATCAGCCCATTATTCACTTTGACATAAATCCTCACAACGTGTTACTTGATGACAACTTCACTCCAAAAATCTCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCCAGTTTGGTGTCCATGACAGCTGCTAGAGGAACTTTGGGATACATTGCACCTGAAGTCTTCTCCAGAAACTTTGGGAACGTGTCTTACAAGTCCGATATTTACAGTTATGGAATGCTGTTGTTAGAAATGGTTGGTGGGAGAAAGAATGTGGACATGTCTTCTCCACAAAATTTACATGTTCTATACCCGGATTGGATCCATAACCTGGTTGATGGAGATGTACATATCCATGTTGAGGATGAAGGTGATGTTAAGATTGCAAAGAAACTAGCAATTATTGGGCTTTGGTGCATTCAGTGGGAGCCAGTGAACCGTCCATCCATAAAATCTGTGATACACATGCTACAAACTGAAGAGGAAAACCAGCTTGGTGTGCCTCCTAATCCATTTCACTCAACAACTTCCACTACAGCTAAGGGACTCAGTTCCACAAGACGACCTTTGCAGTTGGAAGTGATTCAAGAATGA 1812 0.4294 MTLLLLLLLMLLLITTGSSAHNECDEELSCGPNQPPIRFPFQLIKEMGEPCGYPRICLSCTENNKTMLALPTMKLLVTYINYRYQEIGLTDPENCFSNKFNQTINFIRTYQFESLHDGPHNNLSFFNCTSAEHSHLRNYYEDGSDSQDMVSCPIYVSNSFESVLQLDLTSCTKMFDLTAPFASIHWNELVLRWSKPNCAECKRKGKRCTWKTNNTTGDIDCFECKPKRIHVPKSFIFASTGSILLGLLVIAVFKSILYFRKKQEDQARVDKFLEDYRAEKPARFTYADLKRITNGFKEKLGEGAHGAVFRGKLSSEIPVAVKILNSTEGDGNEFINEVGIMGKIHHINVVRLLGFCADGLHRALVYNFFPNGSLQSFIFLPEDKDHFLGWEKLQHVALGIAKGIQYLHQGCNQPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSPQNLHVLYPDWIHNLVDGDVHIHVEDEGDVKIAKKLAIIGLWCIQWEPVNRPSIKSVIHMLQTEEENQLGVPPNPFHSTTSTTAKGLSSTRRPLQLEVIQE* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0717 603 Gene3D Phosphorylase Kinase; domain 1 267 368 - -
Pvu1g0717 603 Gene3D Transferase(Phosphotransferase) domain 1 369 573 - -
Pvu1g0717 603 PANTHER RECEPTOR-LIKE KINASE 13 603 - -
Pvu1g0717 603 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 603 IPR045874 GO:0004672
Pvu1g0717 603 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Pvu1g0717 603 SUPERFAMILY Protein kinase-like (PK-like) 278 564 IPR011009 -
Pvu1g0717 603 Pfam Protein tyrosine and serine/threonine kinase 296 563 IPR001245 GO:0004672|GO:0006468
Pvu1g0717 603 Pfam Wall-associated receptor kinase galacturonan-binding 24 91 IPR025287 GO:0030247
Pvu1g0717 603 ProSiteProfiles Protein kinase domain profile. 294 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0717 Pvu-Chr1 9110844 9112834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0717 3 592 Receptor kinase-like Gene Family AT1G66910 31.579 4.38e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0717 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0717 - - gmx:100811907 901.738