Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0713 ATGACAACAAAAATAATTATCAAAAGATATGTTATTGTCACCGTATTGTTTATTGCTATTTTGACATACAAGTGGAGAAGAAGACACTCATCAGAATACGAAAATATTGAAAGTTATTTAGAGCAAAATAACTTGATGCCTATTCGATACACATACAAAGAAATTAAGAAGATGGCCATAGGTTTCAGCGAAAAGTTGGGTGAAGGAGGTTATGGCTCTGTATTTAAGGGAAAGTTGCGTAGTGGACCTTGTGTTGCCATAAAAGTGTTACGAAAATCAAAAGGTAATGGACAAGACTTTATCAATGAAGTTGCAACAATTGGAAGAATACATCATCAAAATGTAGTACAGTTAATTGGATATTGTGTTGAGGGCTCAAAACATGCCCTTGTTTATCAGTTCATGTCCAATGGATCTCTTGACAAATTTATATTTTCCAGAGAAGGAAATTTGCATTTAACCTATGACACAATATATAATATAGCAATTGGAGTAGCACGTGGGATTTCATATCTACACCATGGGTGTGAGATGCAGATTTTGCATTTTGACATCAAACCCCACAACATCTTGCTTGATGAAAAATTTACCCCAAAAGTTTCTGACTTTGGATTGGCAAAACTATATCCAATAGATAAAAGTGTTGTAACTATGACAGCAGCAAGAGGGACAATTGGATACATGGCTCCAGAATTGTTTTATACAAATATAGGAAGAATATCAGATAAGTCTGATGTTTATAGTTTTGGAATGCTTCTAATGGAGATAGCAAGCAAGAGGAAAAACTTAAACCCCCATGCAGAGCGTTCAAGTCAACTTTACTTTTCCTTTTGGATTTATGATCAACTTGACAAAGAGAAAGATATAGATATGGAAGATGTCATAGAGGAAGAGAAGAAAATTGCAAAAAAAATGATGATAGTTTCACTCTGGTGCATACAATTAAAACCAAATGATCGTCCTTCCATTAATAAGGTAGTCGAAATGCTTGAAGGAGACATTGAGAACCTTAAAATTCCTCCAAAGCCTTCTCTGTATCCACATGAAACATTGGAAAAAATTTGCTCTGGCCAAACAACATTGTCTGAGTTTATTAGTTCTTCAAGCAATTCCATGGAAATTGCCACTAATGCTCCCCTAGATGAAAGTATTTGA 1155 0.3463 MTTKIIIKRYVIVTVLFIAILTYKWRRRHSSEYENIESYLEQNNLMPIRYTYKEIKKMAIGFSEKLGEGGYGSVFKGKLRSGPCVAIKVLRKSKGNGQDFINEVATIGRIHHQNVVQLIGYCVEGSKHALVYQFMSNGSLDKFIFSREGNLHLTYDTIYNIAIGVARGISYLHHGCEMQILHFDIKPHNILLDEKFTPKVSDFGLAKLYPIDKSVVTMTAARGTIGYMAPELFYTNIGRISDKSDVYSFGMLLMEIASKRKNLNPHAERSSQLYFSFWIYDQLDKEKDIDMEDVIEEEKKIAKKMMIVSLWCIQLKPNDRPSINKVVEMLEGDIENLKIPPKPSLYPHETLEKICSGQTTLSEFISSSSNSMEIATNAPLDESI* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0713 384 Gene3D Phosphorylase Kinase; domain 1 33 134 - -
Pvu1g0713 384 SMART serkin_6 60 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0713 384 ProSitePatterns Protein kinases ATP-binding region signature. 66 88 IPR017441 GO:0005524
Pvu1g0713 384 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 6 361 - -
Pvu1g0713 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Pvu1g0713 384 PIRSF TyrPK_CSF1-R 132 377 - -
Pvu1g0713 384 PIRSF TyrPK_CSF1-R 1 151 - -
Pvu1g0713 384 Gene3D Transferase(Phosphotransferase) domain 1 135 339 - -
Pvu1g0713 384 SUPERFAMILY Protein kinase-like (PK-like) 49 331 IPR011009 -
Pvu1g0713 384 ProSiteProfiles Protein kinase domain profile. 60 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0713 384 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 361 IPR045874 GO:0004672
Pvu1g0713 384 Pfam Protein tyrosine and serine/threonine kinase 62 330 IPR001245 GO:0004672|GO:0006468
Pvu1g0713 384 CDD STKc_IRAK 66 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0713 Pvu-Chr1 9042095 9043560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0713 10 356 Receptor kinase-like Gene Family AT5G38260 46.910 4.50e-109 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0713 PK_Tyr_Ser-Thr 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0713 - - pvu:PHAVU_001G069200g 743.806