Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0706 ATGGCAAGTGTGTTGCTCCTCCAACGTGATTCTGCATTGATGATGCTACTGCTAATGCTTCTTCTTATCAGAACTGGCAGCGCTCATAACGAGTGCGATGAGGAATTCTCTTGTGGGCCGAACCAACCCCCTATCAGATTTCCCTTCCAACTCACAGAGGAGATGAACGAGCCTTGCGGTTATCCCCGTATTTGTCTTTCTTGCACTGAAAATAATGAGACCATGCTTGCGCTTCCTACGATGAAACTCCTAGTCACTTACATAGACTACGAAAGTCAGGAAATTGACTTAATTGACCCCGAAAACTGCTTTTCCAACAAGTTTAACCAAACCATCAATTTTATTCGAACTTACCAATTTGAATCACCATATGATGGACCACACTATAACTTGAGCTTCTTCAACTGCACTTCAGCTGAGCATCCACACCTCATAAACTACTACGACGATGGCTCAGATTCAACACAAGACATGATCTCCTGTCCGATTTACATTTCTAATTCTTTTGATAGTGTCCTCCGATTGGGTCTAACATCCTGTACCAAGATGTTCGACCTCTCTGCGCCAATCCCATTCATCCAATCGAATGATTTGGTTTTGATATGGTCCAAACCAAACTGTGCTGAGTGCAAAGGAAAAGGCAAGAGATGTACATGGAAGACCAACACCACCACAGGTGACACCGAATGTTTTAAATGCAAACCGAAGAGAATTCACGTTCCTATATCTTTTATTTTTGCTACTACAGGTACGATCCTTTTGGGGCTGCTGGTCATTACTGTCTTCAAGACCATCCTCTATTTTAGGAAAAAGCAAGAAGACCAAGCAAGAGTGGGCAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCTGCAAGATTCACCTATGCTGACCTGAAAAGAATCACCAATGGCTTCAAGGAAAAGCTAGGAGAAGGAGCTCATGGGGCTGTGTTCAGAGGAAAACTTTCGAGTGAGATTGCGGTGGCTGTGAAGATCCTCAACAGTACGGAGGGAGAGGGGAATGAGTTCATCAACGAAGTCGGAATTATGGGCAAAATCCATCACATCAACGTGGTGCGTTTGCTTGGTTTCTGTGCAGATGGACCCCATCGTGCTCTTGTCTACAATTTCTTTCCAAACGGTTCCTTACAAAGCTTCATATTTCCACCAGAAGACAAGGACCATTTCCTTGGATGGGAGAAGCTTCAACACGTTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGCAATCGTCCCATAATTCACTTTGACATAAATCCTCACAACGTGTTACTTGATCACAACTTCACTCCAAAAATCTCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCCAGTTTGGTGTCCATGACAGCTGCTAGAGGAACTTTGGGATACATTGCACCTGAAGTCTTCTCCAGAAACTTTGGGAACGTGTCTTACAAGTCTGATATTTACAGTTATGGAATGTTGTTGTTAGAAACGGTTGGTGGGAGAAAGAATGTGGACATGTCTTCTCCACAAAATTTCCATGTTCTATACCCGGATTGGATCCATAACCTGGTTGATGGAGATGTACATATCCATGTTGAGGATGAAGGTGATGTTAAGATTGCAAAGAAACTAGCAATTATTGGTCTTTGGTGCATTCAGTGGGAGCCAGTGAACCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTGAAGAGGAAAACCAGTTGGTTGTGCCTCCTAATCCATTTCACTCAACAACTTCCACTACAGCTAAGGGACTCAGTTCCACAAGACGACCTTTGCAGTTGGAAGTGATTCAGGAATGA 1839 0.4318 MASVLLLQRDSALMMLLLMLLLIRTGSAHNECDEEFSCGPNQPPIRFPFQLTEEMNEPCGYPRICLSCTENNETMLALPTMKLLVTYIDYESQEIDLIDPENCFSNKFNQTINFIRTYQFESPYDGPHYNLSFFNCTSAEHPHLINYYDDGSDSTQDMISCPIYISNSFDSVLRLGLTSCTKMFDLSAPIPFIQSNDLVLIWSKPNCAECKGKGKRCTWKTNTTTGDTECFKCKPKRIHVPISFIFATTGTILLGLLVITVFKTILYFRKKQEDQARVGKFLEDYRAEKPARFTYADLKRITNGFKEKLGEGAHGAVFRGKLSSEIAVAVKILNSTEGEGNEFINEVGIMGKIHHINVVRLLGFCADGPHRALVYNFFPNGSLQSFIFPPEDKDHFLGWEKLQHVALGIAKGIEYLHQGCNRPIIHFDINPHNVLLDHNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLETVGGRKNVDMSSPQNFHVLYPDWIHNLVDGDVHIHVEDEGDVKIAKKLAIIGLWCIQWEPVNRPSIKSVIHMLETEEENQLVVPPNPFHSTTSTTAKGLSSTRRPLQLEVIQE* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0706 612 Gene3D Transferase(Phosphotransferase) domain 1 378 583 - -
Pvu1g0706 612 Pfam Wall-associated receptor kinase galacturonan-binding 32 99 IPR025287 GO:0030247
Pvu1g0706 612 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Pvu1g0706 612 Gene3D Phosphorylase Kinase; domain 1 278 377 - -
Pvu1g0706 612 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 612 IPR045874 GO:0004672
Pvu1g0706 612 ProSiteProfiles Protein kinase domain profile. 303 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0706 612 SUPERFAMILY Protein kinase-like (PK-like) 288 573 IPR011009 -
Pvu1g0706 612 PANTHER RECEPTOR-LIKE KINASE 20 612 - -
Pvu1g0706 612 Pfam Protein tyrosine and serine/threonine kinase 305 572 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0706 Pvu-Chr1 8941045 8943271 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0706 1 586 Receptor kinase-like Gene Family AT5G38260 32.805 8.11e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0706 PK_Tyr_Ser-Thr 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0706 - - gmx:102662104 894.419