Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0696 ATGGATCAGCACCACTTCCTCCACCACCACCACTACCACCACCCTCAGGACCACCGCACAACCCGCTACACTTCCCTCAACCCTCAATCGCATCACCACCACCACCATAACAACCTCCCTCCGCCGCCGCCCGCTCCGCCGCCGCCTCTCTCCTACCACCGCACCCTCCACACGCCTCCCGCGCCGCAACCCTACACCCCTTCTACACCCCAACACCAACAACAGCAGCAGCAGCAACAACAATTCTCTTTCAACCATCACACAACTCTCCCACACCGCTCCCTCGAAGATGATTCCCGCTCTCTCCCCTACGACCTCCTCCCTCGCCGCGCCTCTGCCATCCCCTGGAACCCTAACCCTAGAACTGACGATTTCGACCGCGAATTTCACCATCACCACCACCGCCCTCCGCCACCACCGCCTCCCCCGATCGAAACCCTACGCTACGACCCCGGGCGCCGTGAGCGCCTCGTGGTGGATCCCTATGAGCAGAATCCCAGGGAGGCACTCGCGTGGGGCGGCGGTGACTACCACGCGCCGAGCCAGGGCGACGTAGAGCCTTCTCCTTACGTGCGCGTGTACAGCGTGGAATGCGATGCTGACGTGGCGGGCAGAGGGTCCCGGGTCGAGAGCAAGAGGTGGGTGATGAGTGATAGAGAGAGGGAGAGGGGAAGAGAGTTGCACGAGTCTTCTTCTAATTTGGTTAGCAAGGGTAGTAACAGTGATAAATATTATCATGGTTCTGATAATGTGGGTAGGTATAGTAGAGGGAATAGTAGGGAGTGTGGTCATGAATTCGCACGCACTCCTCCTAAGAAACAGGTGCAGAAGAAGAGCGCGCTTCTTAGGATTCAGACTGTTAAACCTAATCATAGGAACCGTGAGGTTGAGCAGTCACGGTACCCCGGTTATGGACCTGAAGGTAGCAATGGCTTTTTCAGGGGGAAGGAGCAATATTTGGCTCATGGGGTTAAGGGGGAAGAGAGAGAAGGGAGCCCTGTTGAGATTGATATCTCTTTTGAGTCCAATTCTCTGGTGGCCAAGGCTATTGTTGCGCCGCCTTCGAGTTCAGTGTCTGTTCCTGATTTGAATGTGACGCCGGTTTTGGATTCGGATTTGGGTTCTGGGGATAGGAATAAAAGGATTTCGGGCTCTGATGGCTATTGTTCGGGTTTGCAGCAGCCGTTTAGAGTGTCTTCTGTTGTGGTTGTGGATTTAAATAGGTCGCCTAGTAAAGGGAATGATAGGTCTAGTTTGGGGAAGGAGGTTATTGTGCGGAAGAATGTTGAGGATGGTTCTTCTCGGTCTCGCACCAGGGAGGCTGATGATTCTCGTGGGAAAAATGTGGTGCCAAATTCGGTCAAAGTTGGCAATGTCTGTTCTGGTAAATCGACCATGACGGTTGTCAAGAAGAAGAAAATTGTTAAGAAAGTGGTGAAGAAAGCGACTGCAAACTCTAAGACATCTGTGTCAAATTCACTGCCGGCAAAAAGGCTTCCTGGAACTGTGAAAGTGGAGAGTGCTGCACTGAGTTCGTCAACTGCCTCTGTTCCTGACAAAATTGGAGCTAATTCAGATGAGAAAAGGAACATTGTTGATGAGGTGGCTGGGCCAGACTGTTTGCACTCTTTGCCAAAGGAAGGAAATGTATTGAAAGAAGAAAAAGAGGGAGGTTTGCTGCAGCTGAGTTTGGGGCCAGATTCCACATCGCAAGAGTGTAGTAGGAGTGACAAAGATTCTGATAATAGGGAAGTATCCAGGTTTGAAGTTGAAAGAGATGGAAACATTCTAAAATTTCCATCTTGTGCATCTAGTAGTGAAGATAAGAAGAGTGATTCAGATTGTTTAAATGCAAATCATAATGTCCTTGATAATGGAAATATTATTTCTATGCATGATAATTCAAATACTTCCGATTGTTTAGATGCAAATAATTCTGTTCCAAATACTTACATGGTTACTGAATTCTTAAGTGGAAGCACTATTTCTGAAGTCAATCACATGGATTATGATAATAAGCAATTGTGTCAGAATGAAGTGTCTCTATCACTTGGGAAATATTCAAATATACAGTCCCCACTGAATAACAATCTTGAAGATGTAGGGGATGAACTATTAAAAACCAGTGATACTTTTTCAAGTTCAAGAAAAACTAGGATTCAAGATTGCCTACAACATGCCAGTGCACTGAAGCACATTTCTGATGATGGATCATCTAATTTAGAAGATTGTATTAGTGTTCACTGCTCTGGTATCATGGATGATGCTGGAAAGCAATTGACCCATGGTGATGTCACCATACACCCTGAGAATTGTGAGACAGGAAAAGCATTCCCAAATTCTAATATTTTAGCTGGATCTGGTGAAGGGGACTCAAAGAAGATAAAAAAGAAAAGATCTAGAACACAATTAAATTTTTTGAGTTCAGAGATGGAGTCCTTATCTACAGATCATGTAAATCCTGTTAGCCTTGCAAATAATGTGGATGGAATCACAAGTCTATTGGTGAAAGATCCATCTGCTTGTGAAGTTTTAGATCAATCTGTTGAAAACGATGTTGACTCAATAACTGGTCTGGATGGGGTTACTGCTTTACATGAGAAAGGGGGGGTTTTAGAGTCTCAGTTTTATGCTGCAAATAACAGCAACGATGATGCAAGTGAGGTTTCACCATCTTCTAAAAGGAAAAAAGTGACAGCTAACCCAATTTTCACTCATTGTCAATCGGAAATCAGTGCTATGATTGTAGTTACCACAACGTCTAATGCTGAAGCTCCTGTCAATTTCAATGATAACCAAGAACATCAGAAAGAAGTTGCTTTGTCAAGCATGGGTGTGTGTATTCCGTCTTCTGCTCAGTCAATGTCTTATTCGGAGGATATTACTAAAATGTCTGTCAATATTTTGAGTGGAGGATCTTTTGACTTCATTGATGCAAATAGGGAAACCTCTTTTTCACCATGTGAGGATTTGGCATTTCAAAACGATCAGTTCTCACCATTGGAAGGTGAGTGCACAGAAAACATTACTCCAGTTGTGCTTGTGAGTGATACTCAAACTGATGTTTTAGAACTTGGAAATATAATGGGAGAAAAGACTGATTTACAGGCCGTTAAGGAAAATTACCAATATAAAGACTTTGTGCAAAGGTCACCAAGAGCTGATATGGAACCTAATGATCTCAATGTGAAGAATGATTTGCTTGCTCAGCAGAACCTTATGTCCTGTCCAGCCAGTGGTGACGAAGTCACTACAAGTAATTCGAATGATGAATTGATTGTGGATGCACCTGGTGCATTATCAGATATCTTTTCTCAAGGGATGGCATCTGAAGTACCGGATAGAAGGGTTTTAGAATTGACAGCAATCAATGATGAAAATATCTGTGGGGTTGAAGAAAATACTTCATCAGTACAGGAGATGAAACAGAACGGTAGGTCAGATCATGCATTTGGACATAATATGATGATAAAGAAAACAATTTCAGAATCATCCCAAGTATCTTCCAAAGTTACAACTCAGGCTCTAAATTCATATCGTTTTGGGTTGAGTGGGACCAAAAATCAGTCAGGTAGTGTCATTCCCAAAACTTTTCCAGGTCATTCTCTTACCTTTTCAAGATCGGAGACAAAGTCATCTGCCTCTTCAACTCATGTATCAAAGCCTCGAACTTGGCATCGTACAGGTAATCCCCCTATTTCTCTACCTAGAATCAATTCAGTAGGAACAATTCCTTCCAAAAGACCAATTCTTGAAAGGAAAGGGAACTTTCAAAATACCTCATATGTGCGTAAAGGAAACAGTCTTGTAAGGAAACCTACTCCAGTTTCTGCTCTACCTCAAATCTCCTCTGTTAATCAGTCATCTTCTTTGGGCTTTGATGACGTATCAAAAGGTACTAAATCTGAAAGCAGGGTTGATTTGACAAATCAACCAATGTACCTGAGAGCAGGAGCAACATATTCTCAGCAGAGGCAGAGAACACCTCCACTACCAATTAACACCAAATCCGAGGAAAATACATCTTCCTCACTGGTAGAACCTCCTTCTGGTGGTTCCTGTGAAAATGTATCAGATCCTACGTCATTTATAGAAATTAATAATAATGTACGGAACTCTTCTGAAGACACACTGAAGCATTATGAAATTCCTGAAAACCAACCTGTTCCATTGGACAACGGGGAGAGTCAAGTTGAAGCAAACAATGGCAATCCTCTTTCTTTGAATACGAAGAGAATAGTATATATAAAGCCCAAAACGAATCAATTGGTTGCAACATCAAATTCTTGTGATGTTTCTGTCCCCGCTGATGACAATGGTCAAACTGCCTTCTCTGATGCCTACTACAAGAGAAGAAAAAATCAATTGGTTAGGACTACATTTGAAAGCCACAACAACCAGACTGCTATAGTGCCTAATGGCAAGGCAAATTCTGATGGACAAGGAACTAGTAATGCTCTTTGCAATAGGAGGTTTAGTAAGAAGCGGTTAAATAAGGTTGGCAGGAGTTCATGCAAACGTTCAAGAGCCTCACTAGTGTGGACACTCTGTAGCAAAAGTTCTTCTGAAAATGACAGGAACTCACGGCATTATCAAAAGGTTTTGCCTCAATTGTTTCCATGGAAAAGAGCAACATTTGCTTCAAGTTTCAATAGCAGTTCCGTATCTGCAATCAGCAAAAAATTGCTTCAATTGAGAAAGAGGGATACTGTTTACACTAGGTCAAAACATGGGTTTTCACTTTGGAAATCCAGAGTTTTAGGTGTTGGCGGGTGTAGTTTAAAATGGTCCAAATCCATTGAGAAGAACTCAAAGCAAGCTAATGAGGAAGCTACACTTGCTGTTGCCGCAGTAGAGAAGAAGAAGAGAGAGCAGAAAAATGCGGTTTGCATCAGTTCTCAGTCAAAGAGAGAGCGTATATTTCGTTTTGGCTCAGTTCGTTACAGAATGGATCCCTCCAGGAGGACACTTCAGAGGATTTCAGTCGATGAATCCCAGTCCTCGGCATCTACCAGTTCAGGTTTGGCTTCCAAAAGTGCTTACATTCCAAGGAGATTAGTGATTGGAAGTGATGAATACGTACGAATTGGAAATGGTAACCAGCTTATCAGAGACCCAAAAAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACTGCCAGACAGCGGTTGGCTCGAAAGCAGTATTGTCAGTTTTTTACCAGATTTGGGAAATGTAAAAAGGATGGAGGGAAGTGTCCTTATATTCATGATCCTTCAAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTAACGCACCAGGTTATTCCAGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGCTTATGCTCAAACAGTAATTGTCCATATAGACATGTCAATGTGAACCCCAATGCATCTATTTGTGAAGGATTTCTCAGGGGTTATTGTGCTGATGGGAATGAGTGTCGGAAGAAGCACAGCTATGTGTGTCCTACTTTTGAAGCAACAGGTACCTGTACTGAAGGAGCCAAATGCAAACTTCATCACCCAAAAAAACAGAGGAAGGGAAAGAAAAGGAAGAGATCTGGAGATCAGAACAACACTAGAGGGCGCTATTTTGGTTCTATTCCTGCTGATGTTTCTGAATCTGGGTTGATGGTGGCTCCAAAGCGACATAAACAAAGTGAAATTGAAGAGGAATTGTCTGATTACATCAGCCTTGATGTTGTCAGTGAAGAAGTCGCAGACACTGATGATCTATCATTTGATCCAGCAGTGTTCTGCGAGAATGATTCCTTGGATGATTTTGATGAACTTATTAAACCAGTTCTTCTATTGAAAAGAAAGTTCACATCACAATCACCTAACTCCCATATCCTCGAAGCAAGTGCCGGAGACGTCGGTCGTTTGTAA 5940 0.4308 MDQHHFLHHHHYHHPQDHRTTRYTSLNPQSHHHHHHNNLPPPPPAPPPPLSYHRTLHTPPAPQPYTPSTPQHQQQQQQQQQFSFNHHTTLPHRSLEDDSRSLPYDLLPRRASAIPWNPNPRTDDFDREFHHHHHRPPPPPPPPIETLRYDPGRRERLVVDPYEQNPREALAWGGGDYHAPSQGDVEPSPYVRVYSVECDADVAGRGSRVESKRWVMSDRERERGRELHESSSNLVSKGSNSDKYYHGSDNVGRYSRGNSRECGHEFARTPPKKQVQKKSALLRIQTVKPNHRNREVEQSRYPGYGPEGSNGFFRGKEQYLAHGVKGEEREGSPVEIDISFESNSLVAKAIVAPPSSSVSVPDLNVTPVLDSDLGSGDRNKRISGSDGYCSGLQQPFRVSSVVVVDLNRSPSKGNDRSSLGKEVIVRKNVEDGSSRSRTREADDSRGKNVVPNSVKVGNVCSGKSTMTVVKKKKIVKKVVKKATANSKTSVSNSLPAKRLPGTVKVESAALSSSTASVPDKIGANSDEKRNIVDEVAGPDCLHSLPKEGNVLKEEKEGGLLQLSLGPDSTSQECSRSDKDSDNREVSRFEVERDGNILKFPSCASSSEDKKSDSDCLNANHNVLDNGNIISMHDNSNTSDCLDANNSVPNTYMVTEFLSGSTISEVNHMDYDNKQLCQNEVSLSLGKYSNIQSPLNNNLEDVGDELLKTSDTFSSSRKTRIQDCLQHASALKHISDDGSSNLEDCISVHCSGIMDDAGKQLTHGDVTIHPENCETGKAFPNSNILAGSGEGDSKKIKKKRSRTQLNFLSSEMESLSTDHVNPVSLANNVDGITSLLVKDPSACEVLDQSVENDVDSITGLDGVTALHEKGGVLESQFYAANNSNDDASEVSPSSKRKKVTANPIFTHCQSEISAMIVVTTTSNAEAPVNFNDNQEHQKEVALSSMGVCIPSSAQSMSYSEDITKMSVNILSGGSFDFIDANRETSFSPCEDLAFQNDQFSPLEGECTENITPVVLVSDTQTDVLELGNIMGEKTDLQAVKENYQYKDFVQRSPRADMEPNDLNVKNDLLAQQNLMSCPASGDEVTTSNSNDELIVDAPGALSDIFSQGMASEVPDRRVLELTAINDENICGVEENTSSVQEMKQNGRSDHAFGHNMMIKKTISESSQVSSKVTTQALNSYRFGLSGTKNQSGSVIPKTFPGHSLTFSRSETKSSASSTHVSKPRTWHRTGNPPISLPRINSVGTIPSKRPILERKGNFQNTSYVRKGNSLVRKPTPVSALPQISSVNQSSSLGFDDVSKGTKSESRVDLTNQPMYLRAGATYSQQRQRTPPLPINTKSEENTSSSLVEPPSGGSCENVSDPTSFIEINNNVRNSSEDTLKHYEIPENQPVPLDNGESQVEANNGNPLSLNTKRIVYIKPKTNQLVATSNSCDVSVPADDNGQTAFSDAYYKRRKNQLVRTTFESHNNQTAIVPNGKANSDGQGTSNALCNRRFSKKRLNKVGRSSCKRSRASLVWTLCSKSSSENDRNSRHYQKVLPQLFPWKRATFASSFNSSSVSAISKKLLQLRKRDTVYTRSKHGFSLWKSRVLGVGGCSLKWSKSIEKNSKQANEEATLAVAAVEKKKREQKNAVCISSQSKRERIFRFGSVRYRMDPSRRTLQRISVDESQSSASTSSGLASKSAYIPRRLVIGSDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQYCQFFTRFGKCKKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHQVIPERMPDCSYFLQGLCSNSNCPYRHVNVNPNASICEGFLRGYCADGNECRKKHSYVCPTFEATGTCTEGAKCKLHHPKKQRKGKKRKRSGDQNNTRGRYFGSIPADVSESGLMVAPKRHKQSEIEEELSDYISLDVVSEEVADTDDLSFDPAVFCENDSLDDFDELIKPVLLLKRKFTSQSPNSHILEASAGDVGRL* 1980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 231 246 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 367 386 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 1204 1241 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 258 272 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 1318 1360 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 1 82 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 419 446 - -
Pvu1g0696 1979 ProSiteProfiles Zinc finger C3H1-type profile. 1784 1810 IPR000571 GO:0046872
Pvu1g0696 1979 Gene3D - 1756 1810 - -
Pvu1g0696 1979 ProSiteProfiles Zinc finger C3H1-type profile. 1729 1758 IPR000571 GO:0046872
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 121 135 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 218 279 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 407 453 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 1859 1873 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 1204 1224 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 1390 1405 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 39 67 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 1384 1405 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 68 82 - -
Pvu1g0696 1979 ProSiteProfiles Zinc finger C3H1-type profile. 1811 1838 IPR000571 GO:0046872
Pvu1g0696 1979 Gene3D - 1811 1874 - -
Pvu1g0696 1979 SUPERFAMILY beta-sandwich domain of Sec23/24 29 149 - -
Pvu1g0696 1979 SMART c3hfinal6 1758 1782 IPR000571 GO:0046872
Pvu1g0696 1979 SMART c3hfinal6 1811 1837 IPR000571 GO:0046872
Pvu1g0696 1979 SMART c3hfinal6 1838 1860 IPR000571 GO:0046872
Pvu1g0696 1979 SMART c3hfinal6 1730 1757 IPR000571 GO:0046872
Pvu1g0696 1979 SMART c3hfinal6 1784 1809 IPR000571 GO:0046872
Pvu1g0696 1979 Coils Coil 1608 1628 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 1859 1884 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 572 587 - -
Pvu1g0696 1979 PANTHER CCCH ZINGC FINGER 327 1957 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 1280 1304 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 560 587 - -
Pvu1g0696 1979 MobiDBLite consensus disorder prediction 111 148 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pvu1g0696 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0696 - - vun:114193719 3189.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0696 1 8727961 8737518 Pvu1g0696 1 8727961 8737518 ECH