Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0693 ATGTCTGCTACTGCTGGTAAGGTCATCAAGTGCAGAGCTGCAGTGGCATGGGAACCAGAGAAGCCACTGTCGATAGAGAACATAGAAGTGGCACCACCAGGGAAAGGAGAAGTGCGTTTGAAAATCCTCTTCAACTCCCTTTGCCGTACTGATGTTTACTGGTGGGATGTTAAGGGTCAGAATCCGCTGTTTCCTCGAATATTAGGTCATGAAGCTTCAGGGATTGTGGAGAGCGTGGGCGAGGGAGTGACCCATCTGAAACCAGGAGATCATGCACTCCCAATATTCACTGGGGAGTGTGGGGAATGCAAATACTGCAAGTCAGAAGAGAGCAACCTGTGTGAAGTGCTAAGGATCAACAGTGACAGAGGAGTTATGCTGAGTGATGGCAAAACAAGGTTCTCCAAAAATGGACAACCCATTTACCACTTTCTGGGAACCTCTACATTCAGTGAATACACTGTTCTTCATGCTGGCTGTGTTGCCAAGATCAACCCTGCTGCTCCACTTGACAAAGTTTGTGTTGTCAGTTGTGGATTTTGCACAGGTTTTGGTGCTACTGTAAATGTTGCAAAACCAAAGCCTAATGATACTGTTGCTGTCTTTGGTTTAGGAGCTGTTGGTCTTGCTGCCTGTGAAGGAGCAAGGGTTTCTGGTGCATCGAGAATCATTGGGGTTGATTTACTTCCTAGTCGATTTGAACAAGCCAAACAATTTGGGGTCACTGAATTTGTGAACCCCAAAGAGCATAACAAGCCAGTTCAAGAGGTAATTGCTGAAATGACTGATGGAGGAGTAGATCGTGCTATTGAATGCACTGGAAACATCCAAGCTTCGATCTCAGCACTTGAATGCACTCATGATGGTTGGGGTGTTGCTGTACTTGTTAGTGTTCCAAAGAAGGATGCTGAATTCAAAACTCATCCTATGAAGTTCATGGAAGGAAGAACTCTCAAGGGTACCTTCTATGGCCACTACAAACCCCGCACTGATATTCCTTCTGTTGTGGAGAAGTACCTCAACAAGGAGCTGGAACTGGACAAATTTATCACTCACACTGTGCCATTCTCAGAGATCAACAAGGCATTTGACCTTATGCTGAGAGGGGAGGGTATAAGGTGTCTCATCTGCATGGAAGAGTGA 1143 0.4584 MSATAGKVIKCRAAVAWEPEKPLSIENIEVAPPGKGEVRLKILFNSLCRTDVYWWDVKGQNPLFPRILGHEASGIVESVGEGVTHLKPGDHALPIFTGECGECKYCKSEESNLCEVLRINSDRGVMLSDGKTRFSKNGQPIYHFLGTSTFSEYTVLHAGCVAKINPAAPLDKVCVVSCGFCTGFGATVNVAKPKPNDTVAVFGLGAVGLAACEGARVSGASRIIGVDLLPSRFEQAKQFGVTEFVNPKEHNKPVQEVIAEMTDGGVDRAIECTGNIQASISALECTHDGWGVAVLVSVPKKDAEFKTHPMKFMEGRTLKGTFYGHYKPRTDIPSVVEKYLNKELELDKFITHTVPFSEINKAFDLMLRGEGIRCLICMEE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0693 380 CDD alcohol_DH_plants 9 376 - -
Pvu1g0693 380 PANTHER ALCOHOL DEHYDROGENASE 4 378 - -
Pvu1g0693 380 PANTHER ALCOHOL DEHYDROGENASE-RELATED 4 378 - -
Pvu1g0693 380 Pfam Zinc-binding dehydrogenase 206 333 IPR013149 -
Pvu1g0693 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Pvu1g0693 380 Gene3D - 20 370 - -
Pvu1g0693 380 SUPERFAMILY GroES-like 4 188 IPR011032 -
Pvu1g0693 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Pvu1g0693 380 Gene3D - 183 321 - -
Pvu1g0693 380 SUPERFAMILY GroES-like 328 376 IPR011032 -
Pvu1g0693 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0693 Pvu-Chr1 8642080 8646688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0693 1 370 Monolignol Biosynthesis Gene Families AT1G72680 24.668 5.04e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0693 K18857 - gmx:100775490 718.383