Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0685 ATGAGATTGAAGGACACGCAAAAGCAACTGACCAGACTGACCGTGTTATTACTGATGGCTTTAGCAGCAGCCAGCCAAGCCCTGCCCGGCTGCCCGGACTCCTGCGGAAATGTTTCAATTCCGTATCCGTTTGGCATCGGCCATTCATCCACCGATAAAAAAAACTGTTTTCTTGAGGATCCTTTGGAGCTTACATGCACAGACTCAGCCTTATTTCAGGGTAACGTCCAAATTCTCAACATAAGCCTCGCCGGTAAAATGGACGTGCTCACCTTCATCGCCGGCGTTTGCAAAAACGATTCGCTTGGTAGAGTACAAACACACGGTAACGAACCCACTCTCAGCACACCGGCTTTCATAATTTCTAGTGAGGACAACAAGTTCGTAAGCGTAGGCTGCGACACTTACGGCTATCTCAACAGTTTCCACAACGGCACAGAATCTTCAACGGGGTGCTTGACCAGATGCAACAGCTTAGACAGCGTTGAAAGCATGCAGAGAAGCGGAAACTGTACGGGCATAGGGTGTTGCCAGGTCGACATTCCTCCTGGGATGAAGAATATTAGCTTGCAAGCATACAGCTTCAACAATTTCAACTCCACTTCCGATTTCAACCAGTGCGGCTTCTCCTTTGTGGTCAAAAATGGCAACTACACTTTCTCCCTCGATCATTTGAAGAGCATCCCGTTCGATAAGGCACTCATGGTCATCGATTGGAGTGTAGGAAACGACACGTGCGACGCTTCCATGGATACAGCAGATTATGCATGCAAGAGTGATAATAGCTATTGCGAGAATTCGCCCTATGAATATGGTTACCGATGCAAATGTAATCCAGGCTTTGAGGGAAGCGCATACCTTCTCCATGGTTGCCAAGACTTTCCGGAGTGTACAAGGAATAAACACAATTGCGATAGTGAAGATCATTGTATAGAAACTTCTGGCTCTTTTGAATGTTTCTGTCCTGACGGACTAATCGGAAATGGGACAAAAGAAGGCGGAGGATGCCACCCAAAGCAGAAGGCTGATCCATTTATCAAGATCGTCATTGGTAACCAAATTATAATTTCGTTTCAGTTTTCTTTTTCTTCCCTTAAGCCACTAATATTTCAATTGCACAAGCCTTGGTGA 1131 0.4607 MRLKDTQKQLTRLTVLLLMALAAASQALPGCPDSCGNVSIPYPFGIGHSSTDKKNCFLEDPLELTCTDSALFQGNVQILNISLAGKMDVLTFIAGVCKNDSLGRVQTHGNEPTLSTPAFIISSEDNKFVSVGCDTYGYLNSFHNGTESSTGCLTRCNSLDSVESMQRSGNCTGIGCCQVDIPPGMKNISLQAYSFNNFNSTSDFNQCGFSFVVKNGNYTFSLDHLKSIPFDKALMVIDWSVGNDTCDASMDTADYACKSDNSYCENSPYEYGYRCKCNPGFEGSAYLLHGCQDFPECTRNKHNCDSEDHCIETSGSFECFCPDGLIGNGTKEGGGCHPKQKADPFIKIVIGNQIIISFQFSFSSLKPLIFQLHKPW* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0685 376 Gene3D Laminin 243 336 - -
Pvu1g0685 376 PANTHER OSJNBA0016N04.9 PROTEIN 8 301 - -
Pvu1g0685 376 SUPERFAMILY EGF/Laminin 296 330 - -
Pvu1g0685 376 PANTHER OSJNBA0016N04.9 PROTEIN 8 301 - -
Pvu1g0685 376 Pfam Wall-associated receptor kinase galacturonan-binding 31 85 IPR025287 GO:0030247
Pvu1g0685 376 Pfam EGF domain 297 330 IPR024731 -
Pvu1g0685 376 SMART egf_5 245 292 IPR000742 -
Pvu1g0685 376 SMART egf_5 296 337 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0685 Pvu-Chr1 8548562 8550125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0685 13 324 Receptor kinase-like Gene Family AT1G21230 34.056 1.84e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0685 - - pvu:PHAVU_001G066500g 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0685 1 8548562 8550125 Pvu9g1359 9 19437341 19440365 PCT