Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0684 ATGAGATTAAAGGACACGCAAAAGCAATTGATCAGACTGACCGTGTTATTACTGATGGCTTTAGCAGCAGCCAGCCAAGCCCTGCCCGGCTGCCCGGACTCCTGCGGAAATGTTTCAATTCCGTATCCGTTTGGCATCGGCCATTCATCCATCGATAAAAAAAACTGTTTTCTTGAGGAACCATTGGAGCTTACATGCACAGACTCAGCCTTATTTCAGGGTAACGTCCAAATTCTCAACATAAGCCTCGCCGGTAAAATGGACGTGCTCACCTTCATCGCCAGGGTTTGCAAAAACGATTTGTTTGGTGGAGTAGAAACATATCGTACCGAAAGTTATCTCAGAACACCGGCTTTCACAATTTCTAGTGAGGACAACAAGTTCGTAAGCGTAGGCTGCGACACTTACGGCTATCTCAACAGTTTCCACAACGGCACAGAATCTTCAACGGGGTGCTTGACCAGATGCAACAGCTTAGACAGCGTTGAAAGCATGCAGAGAAGCGGAAACTGTACGGGCATAGGGTGTTGCCAGGTCGACATTCCTCCTGGGATGAAGAATATTAGCTTGCAAGCATACAGCTTCAACAATTTCAACTCCACTTCCGATTTCAACCAGTGCGGCTTCTCCTTTGTGGTCAAAAATGGCAACTACACTTTCTCCCTCGATCATTTTAAAAGCATGCCGTTCAATCAGTCACTCACGGTCATCGATTGGAGTGTAGGAAACGGCACGTGCGACGCTTCCATGCATAGAGCAGGTTATGCATGCAAGAGTGCTAATAGCTATTGTGATGACTCGCCCTATGAATATGGTTACCGATGCAAATGTAATCCAGGCTTTGACGGAAACGCATACCTTCTCCATGGTTGCCAAGACATTCCGGAGTGTGCACGTAACCAACACAATTGCGATAGTGAAGATCATTGTATAGAAACTTCTGGCTCTTTTGAATGTTTCTGTCCTGACGGACTAATCGGAAATGGGACAAAAGAAGGCGGAGGATGCCACCCAAAGCAGAAGGCTGATCCATTTATCAAGATCGTCATTGGTGCATGTGTAGGATTAATTGCTCTATTTATAGGGGTTTCTTGGCTATACTTGATGTACCAGAAAAGGAAAGTTTTCAAATTAAAGGAGAAGTTCTTTCAGCAAAATGGAGGTATCATTCTGAGACAACAACTCTCCACTAGGGAAGACTCATCTCAGTCCACTACAATTTTTAGTGCAGAGCAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAATCGTAGGTAAAGGAGGTTACGGTACAGTTTTCAAAGGACTTCTATCAAATAATAAAGTTGTTGCTATCAAAAAGTCCAAAATAGTGGATCAGAGCCAGGTGGAGCAATTCATTAATGAGGTCATTATACTCTCACAAATTAATCACAGAAATGTGGTCAAACTCTTGGGATGTTGTCTAGAGACAGAAGTTCCCTTACTAGTTTATGAATTTGTTAACAATGGCACCCTTTTTGATTATCTACATAAACAAGGAGAGGTGGTCAATGTGTCTTGGAAAACGCGTCTAAGGATAGCTACAGAGACAGCTGCAGCTCTGTCATATCTACACTCAGCAGCTTCCATACCCATCATCCATAGAGATGTGAAGACTGCAAACATACTCTTGGATGAAACTTACATTGCCAAAGTGTCTGACTTTGGAGCTTCAAGATTGGTTCCTCTTGACCAAACTGAAATAGCCACAATTGTGCAGGGAACCTTTGGGTATTTAGACCCAGAGTACATGCAATCAAGCCAGTTGACTGAAAAGAGTGATGTCTATAGCTTTGGGGTAGTGCTTGTAGAACTGCTAACAGGCGAGAAACCTTTCTGTTTTAACAGGGCAGAAGAGAAACGAAGTCTCACGGTTCACTTTCTATGTAGCTTGAAAGAGGATCGTTTATTTGATGTTCTTCAGGTGGGTATTTTGGATGAAGAAAACAAGCAAGAGCTTATGGAGGTTGCTATTCTTGCTGCTAGGTGCCTGAGACTTACAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCAATGGAATTAGAGGGAATAAAGCTTACAGAGAAACACCCTTGGATCAATACAAGCAAAAACTTTTTGGAGGGTCAATACTTGCTTCATGAGGCACAAAGCTCCCATGAGCATGGTGATAGTAGTAGTGCCCAACAAAATACTGGATATGATAGCTTGAGAGCACTTGAATTAATTGACATTGGTAATGGAAGATGA 2256 0.4313 MRLKDTQKQLIRLTVLLLMALAAASQALPGCPDSCGNVSIPYPFGIGHSSIDKKNCFLEEPLELTCTDSALFQGNVQILNISLAGKMDVLTFIARVCKNDLFGGVETYRTESYLRTPAFTISSEDNKFVSVGCDTYGYLNSFHNGTESSTGCLTRCNSLDSVESMQRSGNCTGIGCCQVDIPPGMKNISLQAYSFNNFNSTSDFNQCGFSFVVKNGNYTFSLDHFKSMPFNQSLTVIDWSVGNGTCDASMHRAGYACKSANSYCDDSPYEYGYRCKCNPGFDGNAYLLHGCQDIPECARNQHNCDSEDHCIETSGSFECFCPDGLIGNGTKEGGGCHPKQKADPFIKIVIGACVGLIALFIGVSWLYLMYQKRKVFKLKEKFFQQNGGIILRQQLSTREDSSQSTTIFSAEQLKKATNNFDESLIVGKGGYGTVFKGLLSNNKVVAIKKSKIVDQSQVEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHKQGEVVNVSWKTRLRIATETAAALSYLHSAASIPIIHRDVKTANILLDETYIAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFCFNRAEEKRSLTVHFLCSLKEDRLFDVLQVGILDEENKQELMEVAILAARCLRLTGEERPSMKEVAMELEGIKLTEKHPWINTSKNFLEGQYLLHEAQSSHEHGDSSSAQQNTGYDSLRALELIDIGNGR* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0684 751 SMART egf_5 296 337 IPR000742 -
Pvu1g0684 751 SMART egf_5 245 292 IPR000742 -
Pvu1g0684 751 ProSiteProfiles EGF-like domain profile. 293 331 IPR000742 -
Pvu1g0684 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Pvu1g0684 751 Pfam EGF domain 297 330 IPR024731 -
Pvu1g0684 751 ProSiteProfiles Protein kinase domain profile. 420 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0684 751 Pfam Protein kinase domain 425 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0684 751 Gene3D Laminin 244 335 - -
Pvu1g0684 751 SUPERFAMILY EGF/Laminin 292 328 - -
Pvu1g0684 751 Gene3D Transferase(Phosphotransferase) domain 1 496 710 - -
Pvu1g0684 751 ProSitePatterns Protein kinases ATP-binding region signature. 426 449 IPR017441 GO:0005524
Pvu1g0684 751 CDD STKc_IRAK 426 693 - -
Pvu1g0684 751 Pfam Wall-associated receptor kinase galacturonan-binding 31 85 IPR025287 GO:0030247
Pvu1g0684 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 17 713 - -
Pvu1g0684 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 713 IPR045274 GO:0007166
Pvu1g0684 751 Gene3D Phosphorylase Kinase; domain 1 387 495 - -
Pvu1g0684 751 SUPERFAMILY Protein kinase-like (PK-like) 399 691 IPR011009 -
Pvu1g0684 751 SMART serkin_6 420 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0684 Pvu-Chr1 8512728 8515841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0684 10 751 Receptor kinase-like Gene Family AT1G21230 43.495 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu1g0684 Pkinase 3.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0684 - - gmx:100819535 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1359 9 19437341 19440365 Pvu1g0684 1 8512728 8515841 PCT