Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0683 ATGAGAATTAAGGAGACGCAAAAGCATCTGACCAGACTGACCGTGATGTTACTGATGGCTTTAGCAGCAGCCAGCCAAGCCCTGCCCGGCTGCCAGGACTCCTGCGGAAGTGTTTCATCAATTCCGTATCCATTTGGCATCGGCAATTCATCGGTCACCGGTCATAACTGTTTTCAGGAGAAAGAATTGGAGCTTACATGCAGAAACTCAACCTTATATCGCGGCCAAGGTAACGCCCAAATTATTAACATAAGCCTCGCTGGTAAAATAGACATGCTCATGTTCATCTCCAAGGTTTGCAAAAACGAATCGCAAGGTAACCGCCCCAGTCTCAGATCACCGGCTTTCACAATTTCTAGTGAAGACAACAAGTTCGTAAGCGTAGGGTGCGACACTTACGGCTATCTCAACAGTTTTCGCAACGGTACAACATCTTCAACGGGGTGCTTGACGAGACGCGACAGCTTAGAGAGCGTTGAAAGCATGCAGAAGCGGAAACTGTACGGGCATAGGCTTCAACAATTTCAATTCCACTTCCGATTTCAACAAGTGTGGATACTCCTTTGTGGTAAAAATGGCAACTACAGTTTCTCCGTCGATCATTTGAAGGGCATCAACTTCACTATGGCACCCATGGTCATGGAGTGGAGTGTAGGAAACGACACGTGCGACGCTTCCATGCATACAGCAGATTATGCATGCAAGAGTGATAATAGCTATTGTCAGAACTCGCCCTATGAATATGGTTACCGATGCCAATGTAATCCAGACTTTGAGGGAAACCCATACCTTCTCCATGGTTGCCAAGACATTCCGGAGTGTGCACGTAACCAACACAATTGCGATAGTGAAGATCATTGTAGAGAAACTTCTGGCTCTTTTGAATGTTTCTGTCCTGACGGACTCATCGGAAATGGGACAAAAGAAGGCGGAGGATGCCACACAAAGCAGCCGCATGATCCATTTAACAAAATCATCATTGGTGCAGGTGTAGGATTAATTGCTCTGTTTATAGGAGTTTCTTGGCTATACTTGATGTACCAGAAAAGGAAAGTCTTGAAATTAAAGGAGAAGTTCTTTCAGCAAAATGGAGGCATCATTCTAAGACAGCAACTCTCCACTAGGGAAGACTCATCTCAGTCCACTACAATTTTCAGTGCAGAGCAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAATCGTAGGTAAAGGAGGTTTCGGTACTGTTTTCAAAGGACTTCTCTCAAATAACAAAGTTGTTGCTATCAAAAAGTCCAAAATAGTGGATCAGAGCCAGGTGGAGCAATTCATTAATGAGGTCATTGTACTCTCACAAATTAATCACAGAAATGTGGTCAAACTCTTGGGATGTTGTCTAGAGACAGAAGTTCCCTTACTAGTTTATGAATTTGTTAACAATGGCACCCTTTTTCATTATCTACATAAACAAGGAGAGGTGGTCAATGTGTCTTGGAAAATGTGTTTAAGGATAGCTACAGAGACAGCTGCAGCTCTGTCATATCTACACTCGGTAGCTTCCATACCCATCATCCATAGAGATGTGAAGACTTCAAACATACTTTTGGATGAAACTTACAATGCCAAAGTTTCTGACTTTGGAGCTTCAAGATTGGTTCCTCTTGAACAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGGTATTTAGACCCAGAGTACATGCAATCAAGTCAGTTGACTGAAAAGAGTGATGTTTATAGCTTTGGGGTAGTGCTTGTAGAACTGCTAACAGGGGAGAAACCTTTCTGTTTTGACAGGTCAGAAGAGAAACGAAGTCTCACGGTTCACTTTCTATGTAGCTTGAAAGAAGATCGTCTGATTGATGTTCTTCAGATGGGTATTTTAGATGAAGAAAACAGGCAAGAGGTTGTGGAGGTTGCTATTCTTGCTGCCAGGTGCCTTAGACTTACAGGGGAGGAAAGGCCTAGTATGAAGGAAGTGGCAATAGAATTAGAGGGAATAAAGCTTACGGAGAAACATCCTTCGATCAAAACAGGCAGAAACTTTGAGGTGGGTCAATACTTGCTTCATAAGACACAAAGCTCTCGTGAACATGGTGATAGTAGTAGTTCCCAACAAAATACTGGATATGATAGCTTGAGAGCACTTGAATTAATTGAGTTTGGTAATGGAAGATGA 2187 0.428 MRIKETQKHLTRLTVMLLMALAAASQALPGCQDSCGSVSSIPYPFGIGNSSVTGHNCFQEKELELTCRNSTLYRGQGNAQIINISLAGKIDMLMFISKVCKNESQGNRPSLRSPAFTISSEDNKFVSVGCDTYGYLNSFRNGTTSSTGCLTRRDSLESVESMQKRKLYGHRLQQFQFHFRFQQVWILLCGKNGNYSFSVDHLKGINFTMAPMVMEWSVGNDTCDASMHTADYACKSDNSYCQNSPYEYGYRCQCNPDFEGNPYLLHGCQDIPECARNQHNCDSEDHCRETSGSFECFCPDGLIGNGTKEGGGCHTKQPHDPFNKIIIGAGVGLIALFIGVSWLYLMYQKRKVLKLKEKFFQQNGGIILRQQLSTREDSSQSTTIFSAEQLKKATNNFDESLIVGKGGFGTVFKGLLSNNKVVAIKKSKIVDQSQVEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFHYLHKQGEVVNVSWKMCLRIATETAAALSYLHSVASIPIIHRDVKTSNILLDETYNAKVSDFGASRLVPLEQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFCFDRSEEKRSLTVHFLCSLKEDRLIDVLQMGILDEENRQEVVEVAILAARCLRLTGEERPSMKEVAIELEGIKLTEKHPSIKTGRNFEVGQYLLHKTQSSREHGDSSSSQQNTGYDSLRALELIEFGNGR* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0683 728 Pfam Protein kinase domain 402 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0683 728 SMART serkin_6 397 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0683 728 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 696 IPR045274 GO:0007166
Pvu1g0683 728 CDD STKc_IRAK 403 670 - -
Pvu1g0683 728 SUPERFAMILY Protein kinase-like (PK-like) 376 667 IPR011009 -
Pvu1g0683 728 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 17 696 - -
Pvu1g0683 728 SMART egf_5 273 314 IPR000742 -
Pvu1g0683 728 SMART egf_5 222 269 IPR000742 -
Pvu1g0683 728 Gene3D Transferase(Phosphotransferase) domain 1 473 689 - -
Pvu1g0683 728 ProSiteProfiles EGF-like domain profile. 270 308 IPR000742 -
Pvu1g0683 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Pvu1g0683 728 Gene3D Laminin 220 312 - -
Pvu1g0683 728 ProSitePatterns Protein kinases ATP-binding region signature. 403 426 IPR017441 GO:0005524
Pvu1g0683 728 Gene3D Phosphorylase Kinase; domain 1 364 472 - -
Pvu1g0683 728 ProSiteProfiles Protein kinase domain profile. 397 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0683 728 Pfam Wall-associated receptor kinase galacturonan-binding 31 88 IPR025287 GO:0030247
Pvu1g0683 728 Pfam Calcium-binding EGF domain 270 303 IPR001881 GO:0005509
Pvu1g0683 728 SUPERFAMILY EGF/Laminin 269 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0683 Pvu-Chr1 8501147 8504760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0683 13 728 Receptor kinase-like Gene Family AT1G21230 40.933 6.32e-175 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu1g0683 Pkinase 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0683 - - gmx:100819535 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0683 1 8501147 8504760 Pvu9g1360 9 19441516 19445058 PCT