Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0682 ATGAGAGTTAAGGAGACGCAAAAGCATCTGACCAGACTGACCGTGCTGTTACTGATGGCTTTAGCAGCAGCCAGCCAAGCCCTGCCCGGCTGCCAGGACTCCTGCGGAAGTGTTTCATCAATTCCGTATCCATTTGGCATCGGCAATTCATCGGTCACCGGTCATAACTGTTTTCAGGAGAAAGAATTGGAGCTTACATGCAGAAACTCAACCTTATATCGCGGCCAAGGTAACGCCCAAATTATTAACATAAGCCTCGCTGGTAAAATAGACATGCTCATGTTCATCTCCAAGGTTTGCAAAAACGAATCGCAAGGTAACCGCCCCAGTCTCAGATCACCGGCTTTCACAATTTCTAGTGAAGACAACAAGTTCGTAAGCGTAGGGTGCGACACTTACGGCTATCTCAACAGTTTTCGCAACGGTACAACATCTTCAACGGGGTGCTTGACGAGATGCGACAGCTTAGAGAGCGTTGAAAGCATGCAGAGAAGCGGAAACTGTCCGGGCATAGGGTGTTGCCAGGTCGACATTCCTCCTGGGATGAAGAATATTAGCTTGCGAGCATACAGCTTCAACAATTTCAATTCCACTTCCGATTTCAACAAGTGTGGATACTCCTTTGTGGTAAAAAATGGCAACTACAGTTTCTCCGTCGATCATTTGAAGGGCATCAACTTCACTATGGCACCCATGGTCATGGATTGGAGTGTAGGAAACGACACGTGCGACGCTTCTATGCATACAGCAGATTATGCATGCAAGAGTGCTAATAGCTCCTGTGAGAACTCGCCCAATGAATATGGTTACCGATGCAAATGTAATCCAGGCTTTGAGGGAAACCCATACCTTCTCCATGGTTGCCAAGACTTTCCGGAGTGTACAAGGAATAAACACAATTGCGATAGTGAAGATCATTGTATAGAAACTTCTGGCTCTTTTGAATGTTTCTGTCCTGACGGACTAATCGGAAATGGGACAAAAGAAGGCGGAGGATGCCACCCAAAGCAGAAGGCTGATCCATTTATCAAGATCGTCATTGATGCAGGTGTAGGATTAATTGCTCTGTTTATAGGAGTTTCTTGGCTATACTTGATGTACCAGAAAAGGAAAGTCCTCAAATTAAAGGAGAAGTTCTTTCAGCAGAATGGAGGCATCATTCTGAGACAACAACTCTCCACTAGGGAAGACTCATCTCAGTCCGCTACAATTTTCAGTGCAGAGCAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAATCATCGGTAAAGGAGGTTATGGTACAGTTTTCAAAGGACTTCTCTCAAATAACAAAGTTGTTGCTATCAAGAAGTCCAAAATAGTGGATCAGAGTCAGGTGGAGCAATTCATTAATGAGGTTATTATACTCTCACAAATTAATCATAGAAATGTGGTCAAACTCTTGGGATGTTGTCTAGAGATAGAAGTTCCCTTACTGGTTTATGAATTTGTTAACAATGGTACCCTTTTTGATTATCTACATAACCAAGGAGAGGTGGTTAATGTGTCTTGGAAAACGCGTCTAAGGATAGCTACAGAGACAGCTGCAGCTTTGTCATATCTACACTCGGCAGCTTCCATACCCATCATCCACAGAGATGTGAAGACTGCAAATATACTCTTGGATGAAACTTACACTGCCAAAGTGTCTGACTTTGGAGCTTCTAGATTGGTTCCTCTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGGTATTTAGACCCAGAGTACATGCAATCAAGTCAGTTGACAGAAAAGAGTGATGTCTATAGCTTTGGGGTAGTGCTTGTAGAACTACTAACAGGGGAGAAACCGTTCTGTTTTGACAGGGCAGAAGAGAAACGAAGTCTTACGGTTCACTTTCTATGTAGCTTGAAAGAGGATCGTCTATTTGATGTTCTTCAGGTGGGTATTTTGGATGAAGAAAACAAGCAGGAGCTTATGGAGGTTGCTATTCTTGCTGCTAGGTGCCTGAGACTTACAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCAATGGAATTAGAGGGAATAAAGCTTATAGAGAAACACCCTTGGATCAATACAGGCAAAAACTTTGAGGAGGGTCAATACTTGCTTCATGAGGCACAAAGCTCCCATGAACATGGTGATAGTAGTAGTGCCCAACAAAATACTGGATATGATAGCTTGAGAGCACTTGAATTAATTGACTTTGGTAATGGAAGATGA 2247 0.4339 MRVKETQKHLTRLTVLLLMALAAASQALPGCQDSCGSVSSIPYPFGIGNSSVTGHNCFQEKELELTCRNSTLYRGQGNAQIINISLAGKIDMLMFISKVCKNESQGNRPSLRSPAFTISSEDNKFVSVGCDTYGYLNSFRNGTTSSTGCLTRCDSLESVESMQRSGNCPGIGCCQVDIPPGMKNISLRAYSFNNFNSTSDFNKCGYSFVVKNGNYSFSVDHLKGINFTMAPMVMDWSVGNDTCDASMHTADYACKSANSSCENSPNEYGYRCKCNPGFEGNPYLLHGCQDFPECTRNKHNCDSEDHCIETSGSFECFCPDGLIGNGTKEGGGCHPKQKADPFIKIVIDAGVGLIALFIGVSWLYLMYQKRKVLKLKEKFFQQNGGIILRQQLSTREDSSQSATIFSAEQLKKATNNFDESLIIGKGGYGTVFKGLLSNNKVVAIKKSKIVDQSQVEQFINEVIILSQINHRNVVKLLGCCLEIEVPLLVYEFVNNGTLFDYLHNQGEVVNVSWKTRLRIATETAAALSYLHSAASIPIIHRDVKTANILLDETYTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFCFDRAEEKRSLTVHFLCSLKEDRLFDVLQVGILDEENKQELMEVAILAARCLRLTGEERPSMKEVAMELEGIKLIEKHPWINTGKNFEEGQYLLHEAQSSHEHGDSSSAQQNTGYDSLRALELIDFGNGR* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0682 748 ProSiteProfiles Protein kinase domain profile. 417 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0682 748 Gene3D Phosphorylase Kinase; domain 1 384 492 - -
Pvu1g0682 748 Gene3D Transferase(Phosphotransferase) domain 1 493 704 - -
Pvu1g0682 748 SUPERFAMILY EGF/Laminin 293 327 - -
Pvu1g0682 748 Pfam Protein kinase domain 421 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0682 748 SMART serkin_6 417 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0682 748 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524
Pvu1g0682 748 CDD STKc_IRAK 423 690 - -
Pvu1g0682 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 17 717 - -
Pvu1g0682 748 SUPERFAMILY Protein kinase-like (PK-like) 397 688 IPR011009 -
Pvu1g0682 748 Gene3D Laminin 240 332 - -
Pvu1g0682 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 717 IPR045274 GO:0007166
Pvu1g0682 748 Pfam Wall-associated receptor kinase galacturonan-binding 31 88 IPR025287 GO:0030247
Pvu1g0682 748 SMART egf_5 242 289 IPR000742 -
Pvu1g0682 748 SMART egf_5 293 334 IPR000742 -
Pvu1g0682 748 Pfam EGF domain 294 327 IPR024731 -
Pvu1g0682 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0682 Pvu-Chr1 8490434 8494585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0682 13 748 Receptor kinase-like Gene Family AT1G21230 43.808 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu1g0682 Pkinase 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0682 - - gmx:100819535 1141.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0682 1 8490434 8494585 Pvu9g1364 9 19468819 19471762 PCT