Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0664 ATGTCATTGGTTATATCCACGGAATTGGCTGATACATCGTATGGGAATGCCAAGCTCTACACACTAAAGGGAACTGATGTTACACCTGATCTGTCCTCCCACAATTTTGTTCCAGATAAGCACAGAAACATGTATATCACAGATTCTTACTCCAGTGAGAATTATGAAAAGTACTTCCGTTATTCACCATCAGAAGAACTGATAGAACCGTCTAGTTCCAGCATATCAGGAAATTCAGTTCACCCTGATGGTGCCTCTTCTTACCTGCTCAGAGCTAGTTCAGGAGCTTCTGTGATTGTTAATAACCCATTTGACACTCGTATCCTGTCTACAAGGCGTCGCAATGCCTATCAGTCCAATTTTGAATCAGATTTCGTGGAAAATAGGAGCCCTGATAGCCTTGACTTTGATGGTGAAATGAGATTAAAACTACAAGAATTGGAGAGGGTTTTGTTTTCTGATGAAGAAGAGGAGGAGGAAGATATATTTGAGACTGTCCAAAGCATGGAGATTGATCCTGACTTGGCCGAGTGGGCCAATCCGCTTCAAGATATGCTACTTCATGACTCACCAAAGGAGTCCTCATCCTCAGATTCTTCCAATATTAGCAGCATAAGTAGCACTACCAAAGAAACTTCACAAAACTCTTCCCAGACCCCCAAACAATTACTCTGTGATTGTGCTAGAGCACTTTCAGAAGGAAATGAAGAGCAAGCCACATCTATGATAAACAATCTCAGGCAAATGGTCTCAATTCAGGGGGAACCTTCTCAAAGAATTGCAGCCTACATGGTGGAAGGGCTTGTAGCTCGTGTTGCTTCATCTGGAAAATGCATCTATCAAGCATTGAGATGCAAAGAACCTCCTTCTTCAGATCGCCTGGCAGCTATGCAGATCCTATTTGAGGTCTGCCCGTGTTTTAAATTTGGATACATTGCTGCAAATGGCGCCATAGCTGAGGCTGTTAGAGATGAAAAGAAGGTTCACATAATAGACTTTGACATCAGCCAAGGAACTCAGTACATAACTCTAATACAAACACTTGCATCAATGCCAGGTAGACCACATCATGTGAGATTAACTGGGGTGGATGATCCTGAGACTGTGCAGCGCTCCATTGGTGGCATGAGCATCATAGGACAAAGGCTTGAAAAGCTGGCAGAGGAACTTGGATTGCCATTTGAGTTTCAAGCAGTGGCTTCAAAGACCTCAATTGTCTCACCATCAATGCTCAACTGTCGTCCAGGTGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGTGATGAAACTGTATCCACAGTGAACGAGAGAGACCAACTTCTTCGCATGGTTAAGTGCTTGAATCCAAAACTTGTGACAATTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCAAAGATTTGTTGAAGCATACAATTACTACTCTGCTGTGTTTGACACACTTGATGCAACTCTACCAAGGGAGAGCCAGGACAGGATGAATGTTGAAAGGCAATGTTTGGCAAAGGACATTGTCAACATTGTGGCTTGTGAGGGGGAGGATCGAATAGAACGGTATGAAGTCGCCGGAAAGTGGAGGGCAAGGTTGACAATGGCTGGCTTCACTCCATCCCCAATGAGCACAAATGTGAGAGAAGCAATTAGGAAACTGATTATTAAGCAGTACTGTGACAGGTTCAAGATAAAGGAGGAAATGGGAGCACTTCATTTTGGGTGGGAAGACAAAAACTTAATTGTTGCTTCAGCATGGAAGTGA 1776 0.4364 MSLVISTELADTSYGNAKLYTLKGTDVTPDLSSHNFVPDKHRNMYITDSYSSENYEKYFRYSPSEELIEPSSSSISGNSVHPDGASSYLLRASSGASVIVNNPFDTRILSTRRRNAYQSNFESDFVENRSPDSLDFDGEMRLKLQELERVLFSDEEEEEEDIFETVQSMEIDPDLAEWANPLQDMLLHDSPKESSSSDSSNISSISSTTKETSQNSSQTPKQLLCDCARALSEGNEEQATSMINNLRQMVSIQGEPSQRIAAYMVEGLVARVASSGKCIYQALRCKEPPSSDRLAAMQILFEVCPCFKFGYIAANGAIAEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRPHHVRLTGVDDPETVQRSIGGMSIIGQRLEKLAEELGLPFEFQAVASKTSIVSPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKCLNPKLVTIVEQDMNTNTSPFLQRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARLTMAGFTPSPMSTNVREAIRKLIIKQYCDRFKIKEEMGALHFGWEDKNLIVASAWK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0664 591 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 590 IPR030011 GO:0003700|GO:0005634
Pvu1g0664 591 Pfam GRAS domain family 221 591 IPR005202 -
Pvu1g0664 591 MobiDBLite consensus disorder prediction 187 219 - -
Pvu1g0664 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 590 IPR005202 -
Pvu1g0664 591 MobiDBLite consensus disorder prediction 189 219 - -
Pvu1g0664 591 ProSiteProfiles GRAS family profile. 211 591 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0664 Pvu-Chr1 8082288 8086349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0664 1 591 GRAS Transcription Factor Family AT1G21450 60.267 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu1g0664 GRAS 1.6e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0664 - - gmx:100807048 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0664 1 8082288 8086349 Pvu1g0664 1 8082288 8086349 ECH
Pvu1g0664 1 8082288 8086349 Pvu9g1384 9 19704464 19708206 PCT