Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0663 ATGAGTTCCTCTGAAGCCTTCCTCAGCGTTGAAGAAGATGATTCTACTGCTAACAAAAAGTGCGGCTTGTTCTACGATGTTTATGGACCCGAAGGCAAGGCAGATGTTGTTTTCAATTCTCCAGAAGATAATTCAATTCTTGATCTAAAGGATATTCAAGGACTTGTAACTTGGGTGCTTGGTGAAGGATTTATGCCGTCATGGGTTTTTATTAAGAATAAACCTCTTATTCCCAAAGTGGTTATGGTCTATATGCCAGGCCTAGATGCAGCTTTGTTCTTGTCGCTGTCCAAAATGCTTCGTAATATAAAAAAAATCTGTGGCAAACCAAGGCCTGTCCTGGCTCTTAGCTGTGTGTCAGATAGTATGCAGACGATAGATGCACTCCTAACATGCAAGATGAAAAGAAAAAGGGATGAGAACAGTTCACTTATGAGGAAACCTGCTCTTACATCTCATCAAGAAGAAGGTTGTCGTGATACAGACAGTCTATCATTTACTGAGCTTACTAAAGACATACCTTTCCCTGTTACATACTATACACTAACTGAGAAAGAGCTGGAAGAGAATGGATATTCTTTTAATCAACCAGGTTTTCTTTCTACTTTGCCTGCACCTTCAGGATCTCCTTTTTATGAGATGTTGGCACTTGATTGTGAGATGTGCATAACAAGTGAAGGTTTTGAGCTCACAAGAATTAGTCTAGTGGATGTCAAAGGACAGGTTTTGATAGATAAATTGGTTAAACCGTCAAATGCTATCACTGACTACAACACAAGATTTAGTGGAATAACGCCTGAGATGTTAGATGGGGTGACAACAAGTCTTAGAGACATTCAGGAACTGTTCCTAGAGTTTGTTTACAAGGAGACTATCCTTGTAGGGCATTCTCTGGAAAATGATTTATTAGCATTGAAGATATCCCATGACGTGATCATAGACACAGCAGTGTTGTACAGACACCCCCGAGGAGCATCTCATAAAAAAGCTCTAAGGTTTCTTACTAAGAAATTTCTTGCAAGGGAGATACAACAATCAGAGAATGGACATGACAGCATTGAAGATGCTAGAGCTACCCTGGAATTGGCACTATTGAAGATCAGAAATGGGCCTGACTTTGGTTCCCCTCCGTCCTTTACAAAGAAAAAGTTCCTTTCTATTCTGAGTGAGTCTGGCAAAACTTCATCATTGATTGATGATATATCCATAGTAAAACGGTATGCCTCCGAGTCCTCTAATGCAATTCCAGTGATCTCTGATGATGAAGCACTTGCAAAGACCAAGAAGGAGGTGAAGAATGACAAGGTACATTTTATCTGGACACAGTTTTCGGAGCTACACTCATACCTGAAGAAGAAAGCTGAAGATTCTGATAGCTTGAATGAAAGACTTGCAGAGATGATGGCATTGCAAACATGTCAGAAAAATTCTGATCAACAGAAAGGCTTCAAGTTGAAAGCACCTGCTGAACTGAAGGAAATTCTGGTTCGCATGGATGCTAGAGTTCATAATCTCTATTTGTCATTACCCACAAATGCTATGATGATAATTTTTACTGGACACGGAGACACTGCCATTGTCCGCAGGTTGAGGAGAATGCTTGCAGAGCAGACTGAGCCTAATTTTTGTCGTGAAAAGATTGTGGACATTTTGGCAGAATTTCAGGCTCAAGCTGAAGTAGCATTGTGTTTTGTAGGCATAAAGCATTGA 1710 0.4023 MSSSEAFLSVEEDDSTANKKCGLFYDVYGPEGKADVVFNSPEDNSILDLKDIQGLVTWVLGEGFMPSWVFIKNKPLIPKVVMVYMPGLDAALFLSLSKMLRNIKKICGKPRPVLALSCVSDSMQTIDALLTCKMKRKRDENSSLMRKPALTSHQEEGCRDTDSLSFTELTKDIPFPVTYYTLTEKELEENGYSFNQPGFLSTLPAPSGSPFYEMLALDCEMCITSEGFELTRISLVDVKGQVLIDKLVKPSNAITDYNTRFSGITPEMLDGVTTSLRDIQELFLEFVYKETILVGHSLENDLLALKISHDVIIDTAVLYRHPRGASHKKALRFLTKKFLAREIQQSENGHDSIEDARATLELALLKIRNGPDFGSPPSFTKKKFLSILSESGKTSSLIDDISIVKRYASESSNAIPVISDDEALAKTKKEVKNDKVHFIWTQFSELHSYLKKKAEDSDSLNERLAEMMALQTCQKNSDQQKGFKLKAPAELKEILVRMDARVHNLYLSLPTNAMMIIFTGHGDTAIVRRLRRMLAEQTEPNFCREKIVDILAEFQAQAEVALCFVGIKH* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0663 569 Gene3D - 212 372 IPR036397 GO:0003676
Pvu1g0663 569 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 14 553 - -
Pvu1g0663 569 SMART exoiiiendus 213 372 IPR013520 -
Pvu1g0663 569 CDD REX1_like 215 364 IPR034922 -
Pvu1g0663 569 Pfam Exonuclease 216 362 IPR013520 -
Pvu1g0663 569 PANTHER LD29573P 14 553 - -
Pvu1g0663 569 SUPERFAMILY Ribonuclease H-like 214 367 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0663 Pvu-Chr1 8066317 8076568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0663 207 362 C2H2 Transcription Factor Family AT3G27970 29.885 6.37e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0663 K14570 - gmx:100802793 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0663 1 8066317 8076568 Pvu1g0663 1 8066317 8076568 ECH