Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0661 ATGGTTCCTCCTGGGCCGCCTACGCCACTTGGTGCCCAGTCCGTGCCGTCACTTCTGAGATCGAATTCCGGAATGATGGGGGGTCAAGGCGGTCCTGTGCCTTCACAAACTTCGTTCCCTTCGCTGGTTGCGCAGCGAAACCAGTTTAACAACATGAACATGATTGGTAATATGTCTAATGTAACTTCCTTACTGAATCAGTCTTTTCCGAATGGAATTCCGAATTCTGGGCTAGCTGGGCATGGGAGCAGCCAGCGCAGTGGAGGAGTTGATGCTGGGGCGGAATCTGATCCGCTGTCTGGTGTAGGCAATGGAATCAATTTTGGCAATACTTTGCAATCGAATTTGGGGAACCCGGGTCCATCTGGTCAAGGTCAGGGTCAACAATTTTCAAATGCTTCTGGTAACCAGATGTTGTCAGATCAACAGCATTCCCAGCAACTCGAACTTCAGAGTTTTCAGCATAGTCAGCAATCAATGCAACAATTCTCTGCTCCTCTGAGCGCTCAGCAGCAACAACAGCATTTTCAGTCAATTCGTGGTGGAATGGGTGGTGTTGGATCGGTTAAGTTGGAGCAACAGGTAAACAACGATCAGTTTGGGCAGCAGCAGCAGCAGCAATTACCCTCAAGGAATCTTGCTCAGGTGAAGTTGGAACCTCAACAACTTCAAACAATAAGAAACATGGCAGCAGTAAAAATGGAGCCCCAGCATACTGATCAGCAGTTTTTGCATCAGCAGCAACAACAGCAGCAGCAACAACAACAACAACTTCTCCACATGTCAAGGCAATCCTCTCAGGCTGCTGCTGCTCAGATGAATCATCTTTTGCAGCAACAGAGACTTTTGCAACATCAGCAACATCAGCAACATCAGCAGCAGCAACAGCAGCAGCAGCAACTCTTGAAGGCGATGCCTCAACAACGGCCCCATCTACCACAGCAGTTTCAGCAGCAGAATATGCGGTCTCCTGTGAAACCATCATATGAACCTGGAATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAATAACATTGAATTCTGGAGGAAATTTGTTGCTGAGTATTTTGCTCCGAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTAGCAGACAAACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCGAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTCTGGAAGAGCTCCTTTATGTTGACATGCCTCGAGAATATCATAATTCCTCTGGCCAAATTGTTCTAGATTACGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTCCGTGATGGTCAACTTCGAATAGTTTTTTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCCCGGCGACATGAAGAGCTCATTCCCAGAAGACTTTTAATACCTCAGATTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCAATTACTCAAAATGCGACACCCAATTTATCGGTTCCAGAGTTACAAAGTAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCGAAAGCTTTAGAAGTTCCATTGGTCAATGATTTAGGATATACAAAAAGATATGTGCGGTGCCTTCAGATATCAGAAGTGGTAAATAGTATGAAAGATCTGATAGATTATAGCAGAGAAACACGGACTGGACCCATGGACAGCTTAGCTAAATTTCCTCGGAGAACAACTGGTTCATCTGGACTTCATAGTCAGGCACAACAGTCTGAAGATCAAATACAGCAGCAGTCACAGCCTCAGCAGCCACCCCCGCATATGCCCCATACTTCAAATGGTGATCATAACTCTGTGCAAACTGCTGCAATGCAAATTACTTCTACCAATGGTGTGACAAATGTAAATAATTCTGTCAATGCAGCATCTGCATCAACCGCCACAAGCACCATTGTTGGACTTCTCCACCAGAATTCTGTGAATTCTAGACAAAATTCAATGAACAATGCAAGCAGCCCTTATGGTGGTAGTTCTGTTCAAATTCCATCCCCAGGTTCCTCTGGTAATGTTCCACAGGCACAGCCAAATGCATCCCCTTTTCAATCACCCACACCATCCTCATCTAACAACCCACAAACATCTCATCCGGCATTAACTTCCGCAAACCACATGGGTACAGCAAACTCACCAGCTAATATTTCCTTGCAACAACAGCAGACTTCTCTCCCTGCTGAAGCCGACACAGCTGATGCCCAGAGCTCAGTCCAGAAAATCATTCATGAGATGATGATGTCCTCCCAGATGAACGGCCCAAGTGGAATGGCTGGTGCTGGTTCTCTTGGAAACGACATGAAAAATGTAAACGGGATTCTACCAGGGAGTAACAATTCAGGGCTCAACAATAACAGTGGCCTTGTGGGTAATGGGGCTGTAAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGAATGAGCAATGGAATGAGACCTGTAATGGGACATAATTCCATCATGAATGGAAGGGGAGGGCTGGCATCTCTTGCTCGCGATCAAGTTATGAATCAACAGGATTTGTCAACCCAACTACTTAGTGGGCTAGGAGCAGTAAATGGCTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATGA 2733 0.4541 MVPPGPPTPLGAQSVPSLLRSNSGMMGGQGGPVPSQTSFPSLVAQRNQFNNMNMIGNMSNVTSLLNQSFPNGIPNSGLAGHGSSQRSGGVDAGAESDPLSGVGNGINFGNTLQSNLGNPGPSGQGQGQQFSNASGNQMLSDQQHSQQLELQSFQHSQQSMQQFSAPLSAQQQQQHFQSIRGGMGGVGSVKLEQQVNNDQFGQQQQQQLPSRNLAQVKLEPQQLQTIRNMAAVKMEPQHTDQQFLHQQQQQQQQQQQQLLHMSRQSSQAAAAQMNHLLQQQRLLQHQQHQQHQQQQQQQQQLLKAMPQQRPHLPQQFQQQNMRSPVKPSYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSSRQTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQISQLGAVAQKYQAITQNATPNLSVPELQSNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMDSLAKFPRRTTGSSGLHSQAQQSEDQIQQQSQPQQPPPHMPHTSNGDHNSVQTAAMQITSTNGVTNVNNSVNAASASTATSTIVGLLHQNSVNSRQNSMNNASSPYGGSSVQIPSPGSSGNVPQAQPNASPFQSPTPSSSNNPQTSHPALTSANHMGTANSPANISLQQQQTSLPAEADTADAQSSVQKIIHEMMMSSQMNGPSGMAGAGSLGNDMKNVNGILPGSNNSGLNNNSGLVGNGAVNSNSGVGVGGYGTMGLGPSGMSNGMRPVMGHNSIMNGRGGLASLARDQVMNQQDLSTQLLSGLGAVNGFNNLQFDWKPSP* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0661 910 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 909 - -
Pvu1g0661 910 MobiDBLite consensus disorder prediction 584 636 - -
Pvu1g0661 910 MobiDBLite consensus disorder prediction 75 185 - -
Pvu1g0661 910 Pfam LIM-domain binding protein 337 590 IPR029005 -
Pvu1g0661 910 MobiDBLite consensus disorder prediction 239 325 - -
Pvu1g0661 910 MobiDBLite consensus disorder prediction 681 748 - -
Pvu1g0661 910 PANTHER LIM DOMAIN-BINDING PROTEIN 1 909 IPR029005 -
Pvu1g0661 910 MobiDBLite consensus disorder prediction 594 620 - -
Pvu1g0661 910 MobiDBLite consensus disorder prediction 103 179 - -
Pvu1g0661 910 MobiDBLite consensus disorder prediction 1 39 - -
Pvu1g0661 910 MobiDBLite consensus disorder prediction 14 39 - -
Pvu1g0661 910 MobiDBLite consensus disorder prediction 235 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0661 Pvu-Chr1 8009739 8021477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0661 1 810 C2H2 Transcription Factor Family AT1G43850 59.224 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0661 - - gmx:100787437 1306.97