Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0624 ATGGACAGCCGAAAAGTTGTTGTTTGCGACAACGGAACCGGGTATGTGAAATGTGGATTTTCTGGGGAGGATTTCCCTACATCGGTCTTTCCTTGTGTAGTGGGAAGGCCAATGCTTACCGAACAAGAGTTTAAGGATATTGTTGTTGGCGAAAGCTGTGCAGATTTGGGACATCAGCTTGATGTATCTTATCCTATGAACAACGGGGTAGTGCAAAATTGGGATGATATGTGTCATGTATGGGATCATGCATTTTACAATGAATTGAAGATTAATCCTCCAGACTGCAAGATTCTACTCACCGATTCGCCTCTTAATCCTTCCCAGAATCGTGAAAAAATGGGTGAGATGATGTTTGAGAAGTACAATTTTGCTGGAGTGAATTTACAATTCCAAGCTGTTCTGACATTATGTGCTCAAGGTTTGTTTACTGGATTAGTTATTGAGTCCGGTGATGGTGTCACCCATGTGGTTCCTGTTGTTGATGGCTGTTCTTTTCCTCATATAACTAAACGAATGAATGTTGCTGGTCGACATATAACCTCCTATCTTGTTGACTTGCTTTCAAGGAGGGGGTATGCATTAAATAGGACTGCTGATTTTGAGACGGTTAGGGAAATCAAAGAGAAGCTATGCTATATAAGTTACGACTACAAGAGGGAATACCAGTTGGGGCTTGAGACCACCATCCTTGTTAAAAATTATACTCTTCCAGATGGAAGGGTCATTAAAGTAGGCACCGAAAGGTTCCAAGCTCCTGAGGTTCTTTTCACTCCGGAACTTATAGATGTAGAAGGTGATGGAATTGCTGACATGGTTTTTCGCTGCATTCAGGAAATGGATATTGACAATCGGATGACGTGGTGGGTCAGAAAGGTGGACCCCATGCAGACGATCGCAATGTCAATAGTCACATTGCCAATGGAGTTGCCACGTGGCCCCACCATCGCCTTTGAGGTCAATGGTGGGCCAGAAAGGTGCAGACCACACGCCTAG 996 0.4378 MDSRKVVVCDNGTGYVKCGFSGEDFPTSVFPCVVGRPMLTEQEFKDIVVGESCADLGHQLDVSYPMNNGVVQNWDDMCHVWDHAFYNELKINPPDCKILLTDSPLNPSQNREKMGEMMFEKYNFAGVNLQFQAVLTLCAQGLFTGLVIESGDGVTHVVPVVDGCSFPHITKRMNVAGRHITSYLVDLLSRRGYALNRTADFETVREIKEKLCYISYDYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEVLFTPELIDVEGDGIADMVFRCIQEMDIDNRMTWWVRKVDPMQTIAMSIVTLPMELPRGPTIAFEVNGGPERCRPHA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0624 331 PRINTS Actin signature 25 34 IPR004000 -
Pvu1g0624 331 PRINTS Actin signature 79 97 IPR004000 -
Pvu1g0624 331 PRINTS Actin signature 110 123 IPR004000 -
Pvu1g0624 331 PRINTS Actin signature 135 154 IPR004000 -
Pvu1g0624 331 PRINTS Actin signature 231 247 IPR004000 -
Pvu1g0624 331 SMART actin_3 4 322 IPR004000 -
Pvu1g0624 331 CDD NBD_sugar-kinase_HSP70_actin 7 184 - -
Pvu1g0624 331 Pfam Actin 2 286 IPR004000 -
Pvu1g0624 331 Gene3D - 133 287 - -
Pvu1g0624 331 SUPERFAMILY Actin-like ATPase domain 3 148 IPR043129 -
Pvu1g0624 331 SUPERFAMILY Actin-like ATPase domain 141 287 IPR043129 -
Pvu1g0624 331 Gene3D Actin; Chain A, domain 4 175 266 - -
Pvu1g0624 331 Gene3D - 7 132 - -
Pvu1g0624 331 PANTHER ACTIN 1 290 IPR004000 -
Pvu1g0624 331 PANTHER ACTIN-RELATED PROTEIN 2 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0624 Pvu-Chr1 7408866 7414242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0624 2 285 Cytoskeleton Gene Families AT3G18780 46.875 1.54e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0624 K17260 - gmx:100803980 538.11