Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0618 ATGGCTGTGGAACTCATGGGGTTCCCCAAAATAGATGATCAAAAGGCCATCCAAGAGGCTGCATCCGAAGGCCTCAAGGGCATGGAACACCTGATCCGAATCCTCTCCCACCAACCCTCTCACTTGAACACTGACCTCACCGACGTTACCGTCTCCAAGTTCAAGAAACTCATCTCCCTCCTCAACCGAACCGGCCACGCTCGCTTCAGACGTGCTCCGGTTCAGGCCCCTCAACCTGTTCAAACCCCCGCACCGGTTCACAATCCTCCCTCTGCACCTCTCCATCCTCCTCCCCCGCAAACCGCCAACCTCTCCCTCCCGGCGCTCTTCGCCTCGCCGGCGCCGGTTCACCATGCGCCGGGCAGCGTCACGCTCGACTTCACCAAGCCGCACAACGCGCTCCGGAACTCCAAGGCAAAGTCCGTGGAGCTCGAGTTCTCCAAGGAGACCTTCAGCGTCTCCTCCAACTCCTCCTTCATGTCCTCCGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGATCTTTCTCGCCCCGCCGCCGCCGCCCGCGACCTCCGCCGGAAAACCGCCGGCGTTCAAGAAACGCTGCCTCGAGCACCGCGAACACTCCGACGACGTGTCCGGATCCGGCAAGTGCCACTGCGTCAAGCGAAGGAAAAACAGGGTGAAGAAGACTGTGAGGGTGCCGGCGATAAGTTCAAAGATCGCCGATATTCCGCCGGACGAGTACTCGTGGAGAAAGTACGGTCAGAAGCCGATCAAGGGTTCACCGTACCCTCGGGGGTATTACAAGTGCAGCACGGTGAGAGGGTGTCCCGCGAGGAAACACGTGGAGCGCGCACCAGATGATCCGGCGATGCTGATTGTGACGTACGAGGGGGAGCACAGGCACGCGGTTCAGGCCGCGATGCAGGAGAACGCAGCCGGAGTGGTGGGTTTGGTGTTCGAGTCAACGTAG 960 0.6094 MAVELMGFPKIDDQKAIQEAASEGLKGMEHLIRILSHQPSHLNTDLTDVTVSKFKKLISLLNRTGHARFRRAPVQAPQPVQTPAPVHNPPSAPLHPPPPQTANLSLPALFASPAPVHHAPGSVTLDFTKPHNALRNSKAKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKIFLAPPPPPATSAGKPPAFKKRCLEHREHSDDVSGSGKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGVVGLVFEST* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0618 319 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 317 IPR044810 GO:0003700
Pvu1g0618 319 Pfam WRKY DNA -binding domain 242 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0618 319 Gene3D WRKY domain 225 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu1g0618 319 SUPERFAMILY WRKY DNA-binding domain 238 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu1g0618 319 MobiDBLite consensus disorder prediction 75 105 - -
Pvu1g0618 319 PANTHER WRKY PROTEIN 12 317 - -
Pvu1g0618 319 Pfam Plant zinc cluster domain 194 238 IPR018872 -
Pvu1g0618 319 MobiDBLite consensus disorder prediction 78 103 - -
Pvu1g0618 319 ProSiteProfiles WRKY domain profile. 235 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0618 319 SMART WRKY_cls 240 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0618 Pvu-Chr1 7241162 7243932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0618 1 318 WRKY Transcription Factor Family AT2G24570 61.834 6.51e-116 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu1g0618 WRKY 8.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0618 - - gmx:100127381 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0618 1 7241162 7243932 Pvu1g0618 1 7241162 7243932 ECH