Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0617 ATGGAAGGTTCTAGAATGGAGAATTTGATCAGAGCTGAGAAATCGCTGAGGCTCAGCTTAGAGAAATCGAAGTCGGTAGGGTTAGCATTGGAGAAAGCGGGGCCGAGGTTGGCGGAAATCAGGCAGCGGCTGCCGTCGCTGGGATCGGCGGTGCGGCCGATTCGCGCTGAGAGGGACGCTCTCGTGGCCGTTGGCGGTCACATCAACCGCGCCGTGGGCCCCGCCGCGGCGGTGCTCAAGGTTTTTGACGCCGTCCACGGCCTGGAAAAGTCGTTGCTGTCGGATCCCCGGAGCGACATCGCCGGGTACTTGTCGGTGCTGAAACGTCTCCAGGAGGCGCTGAGGTTCTTGGGGGACAATTGCGGGTTGGCCATACAGTGGTTGGAGGACATAGTTGAGTATTTGGAGGACAATTCCGTTGCTGATCAGGTTTATCTGGCGAATTTGAAGAAGGAGTTGAAGAATCTTCGCGAGTCGCAGCACGGAGAACTCGATGGTGGCTTGTTGGAGGCTGCATTGTGCAAGTTGGAGGATGAGTTCAGGTTGCTGTTGACTGAGAATAGCGTGCCATTGCCGATGTCGGTGGCGGTGGCCGGTGATGGTATGGCGTGCATTGCGCCGTCGCCGCTGCCTGTATCCGTTGTGCAGAAGCTGCAGGCGATTCTGGGGCGGTTGATTGCCAATGACAGGCTGGATAGGTGTGTGGGGATTTATGTTGAGGCCAGGAGTTCCAATGTTAGGGCAAGTTTGCAGGCGCTGAATTTGGATTACCTTGAGATTTCTGTGTCGGAGTTCAATGATGTGCAGAGCATTGAGGGGTATATAGCTCAGTGGGGGAAGCATTTGGAGTTTGCGGTGAAACATTTGTTTGAGGCTGAGTATAAGCTTTGCAATGATGTGTTTGAGAGAATTGGATTGGATGTGTGGATGGGTTGCTTTTCGAAGATAGCTGCGCAGGCGGGTATACTGGCGTTTCTTCAGTTTGGGAAGACAGTTACTGAGAGTAAGAAGGACCCCATTAAGCTTTTAAAGTTGTTGGATATTTTCGCTTCGTTGAGCAAGTTGAGATTGGATTTCAACCGACTTTTTGGCGGTGGGCCATGTGCTGAGATACAGAATTTGACTCGGGATCTTATTAAGAGGGTGATTGATGGGGCTGCAGAGATTTTCTGGGAGCTTTTTGTTCAGGTGGAGTTGCAGAGGCCGAATCCACCACCAGTGGATGGCAGTGTGCCGAGATTGGTGAGCTTTATCACTGATTACTGTAATAAGCTCCTTGGGGAGGACTATAAGCCGATACTGACTCAGGTTCTGATCATTCACAGAAGTTGGAAGCGCCAAAGCTTTCAGGATAGACTCCTTGTTACTGAGATTTTGAATATTGTGAAGGCTGTTGAGCAGAATGTGGAGACTTGGATCAAGGCTTATGATGATCCTACACTGTCCCACTTTTTTGCTATGAACAATCACTGGCATCTGTGCAAGCATTTGAAAGGGACAAAGCTTGGGGAACTCTTGGGGGATTCCTGGCTAAAGAATCACGAACAGTATAAGGAATATTACTCCACAATCTTTTTGAGGGACAGCTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGTTGATTCTTTTCTCTGGAGGACGTGCCACTGCCCGTGACCTGGTTAAGAAAAGGTTGAAGAAGTTCAATGAAGTTTTTGATGAGATGTATACTAAGCAGTCAAGTTGGATAATGCCAGAACGGGATCTGAGGGAGAAGACATGTCAGCTTATAGTGCAAGCTGTGGTGCCTGTATACCGCAGTTACATGCAGAATTATGGTCCTTTGGTGGAGCAAGATGCTAGCTCCACAAAATATGCAAAGTACACAGTTCAGAAGCTTGAGGAAATGCTCTTGTTTCTTTATCGGCCAAGGCCTCTAAGACATGGCAGCTTGAGAAGCCCGACGTTTAGTGCAAAATATGGTAATGGTGTACCTGATCTTCGCAGAACAGCATCTGCAGTTGTGTAA 2013 0.4943 MEGSRMENLIRAEKSLRLSLEKSKSVGLALEKAGPRLAEIRQRLPSLGSAVRPIRAERDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRSDIAGYLSVLKRLQEALRFLGDNCGLAIQWLEDIVEYLEDNSVADQVYLANLKKELKNLRESQHGELDGGLLEAALCKLEDEFRLLLTENSVPLPMSVAVAGDGMACIAPSPLPVSVVQKLQAILGRLIANDRLDRCVGIYVEARSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLSKLRLDFNRLFGGGPCAEIQNLTRDLIKRVIDGAAEIFWELFVQVELQRPNPPPVDGSVPRLVSFITDYCNKLLGEDYKPILTQVLIIHRSWKRQSFQDRLLVTEILNIVKAVEQNVETWIKAYDDPTLSHFFAMNNHWHLCKHLKGTKLGELLGDSWLKNHEQYKEYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSTKYAKYTVQKLEEMLLFLYRPRPLRHGSLRSPTFSAKYGNGVPDLRRTASAVV* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0617 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 659 IPR004140 GO:0000145|GO:0006887
Pvu1g0617 670 SUPERFAMILY Cullin repeat-like 78 636 IPR016159 -
Pvu1g0617 670 Gene3D Exocyst complex component Exo70 128 642 - -
Pvu1g0617 670 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 659 - -
Pvu1g0617 670 Pfam Exo70 exocyst complex subunit 277 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0617 Pvu-Chr1 7212983 7216563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0617 6 670 EXO70 exocyst subunit family AT4G31540 72.674 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0617 K07195 - gmx:100796139 1221.45