Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0565 ATGGCTCAGAAAAACAATGGCAACAACAACATTGTGACCCAACAACAACATCAACAGCTCGGGAAGCCCATGTTCCATGACTTCCTTGGCACCAAGAACTGCAACCCCATTCACTCCAATGTCCTTTATGGCCCCAAAACCCCTCATCTTTACGTCACCGCCTCCTCCCTGTCTTCCACCACCGTGTTCAGCGGCGCTGCCACCTCCGACCTCGCTTCTGAAAGACACACAGGGAATCATCTCGTGGGAGTTCCATTCTATGGTCCAAAGAGTGATTTCTGTGGCACTGAGATAGGTAACAGAGTAGTGAGGAACAATAGAACTAATTCTGATACCACTTTTATCGGTTCCTCCAGAGATTCCTTCCAAATGGTCCCTCATTCCCTTCAAAACTCACAGTCGATGAAGATGCTCCGGAATGCAGCTACAGCTGATTGCCTTAGAAGGTCTAATGATGATGCTGTGTTTCTTCCTGTGCAGTCACTGAAGCCAACCAGTGGTTCTCAGAAATTGCAGACTCCCACTGGAACTATGTCTGATGCAAATAAATGGGATCGATCCATTCTCATGAATTTTGGTCCTTTCATGCAGCATCCACCTCATGTTGGTCAATTAGCGCCTCTTATGGACCAAATAACTTCAAACAAGAAGAGTGATACCAGTGCTGGTCCTTCATTTATCTCTCAGTTAGCTGCTGATGAAGGGTCTAGAACCGGAATCAAGGGCCCTGGGCTTTTGAGTTCCATGAACACAATCAATGCTGTCACTGATAAGACTTCTTCCATTCTTGGTGGCAGCAGACCAAAGCCTGTGACAGACATAGTAGACCCAGAATCTTCCACAATTCTCAATCAAGGTGGCTCATCATCTGCCAGCTGTCAGATGACTATTTTTTATGGAGGTCAAGCTCATGTGTTTGATGATGTACAGCCTAATAAGGCTGATGTTATAATGGCTTTAGCTGGGTCAAATGGTGGATCTTGGACCACAACATTCTCGTCCAAATCTTCTGTAAAGCTACACCATGATAGCAACTCGCAAAGAAATTCTAGTCATGCCACTGAACCAGGTCATGGACTAACTTCTACAACAG 1093 0.4575 MAQKNNGNNNIVTQQQHQQLGKPMFHDFLGTKNCNPIHSNVLYGPKTPHLYVTASSLSSTTVFSGAATSDLASERHTGNHLVGVPFYGPKSDFCGTEIGNRVVRNNRTNSDTTFIGSSRDSFQMVPHSLQNSQSMKMLRNAATADCLRRSNDDAVFLPVQSLKPTSGSQKLQTPTGTMSDANKWDRSILMNFGPFMQHPPHVGQLAPLMDQITSNKKSDTSAGPSFISQLAADEGSRTGIKGPGLLSSMNTINAVTDKTSSILGGSRPKPVTDIVDPESSTILNQGGSSSASCQMTIFYGGQAHVFDDVQPNKADVIMALAGSNGGSWTTTFSSKSSVKLHHDSNSQRNSSHATEPGHGLTSTT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0565 364 PANTHER PROTEIN TIFY 8 58 350 - -
Pvu1g0565 364 MobiDBLite consensus disorder prediction 349 364 - -
Pvu1g0565 364 MobiDBLite consensus disorder prediction 339 364 - -
Pvu1g0565 364 ProSiteProfiles Tify domain profile. 288 323 IPR010399 -
Pvu1g0565 364 Pfam tify domain 290 322 IPR010399 -
Pvu1g0565 364 SMART tify_2 288 323 IPR010399 -
Pvu1g0565 364 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 58 350 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0565 Pvu-Chr1 6421223 6425466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0565 1 321 Tify Gene Family AT4G32570 35.905 5.69e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pvu1g0565 tify 3.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0565 - - var:108319287 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0565 1 6421223 6425466 Pvu9g0998 9 14927858 14936283 PCT