Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0558 ATGAGATCAATGGAGAGTAGTGAGACACGTAGAGTAGAGGGTCAACGAGGGAGAGGGTTTGACATGTGGAGAAACCATTGCATGGGGGTTTTCTCAACTTCTGAACGTGAAGAAGATGAGGAAACTCTCAAGTGTGTGGCAATAGAGAGACTCCTTGCAAGGGCATGCACCAAGAGAAGTGTGCTCAACCAAGTGGAAGGGAAAGCAGAAGAGGTTGACATCAAGCAATTGGAGTTATCAGAGAGAAAGAGCCTTCTAGAGAGACTTGTGAAGATAGCAGAAGAAGATAATGAGAGGTTCTTGTTGAAGCTCAGGGAAAGGATGAACAGAGTTGGGCTTGAAATTCCAACAATTGAAGTTCGATTTGAGCATATAAATGTTGAAGCACAAGTTTATGTTGGAAGCAGAGCATTGCCTACCTTACTCAACTTCTTTGTGAATGTGCTTGAGGGACTCTTAAATTCTCTTCACATGATTAAAAGTCCAAAGAAACCGTTACATATCCTGCAGAATGTTAGTGGAATCATAAAGCCTAAAAGAATGGCATTGCTTTTAGGGCCACCAGGATCTGGAAAGACCACATTGCTGTTGGCATTGGCTGGAAGACTTGGTAAAGATTTGAAGCATTCTGGGAGAGTAACATACAATGGACATGGGCTTGAGGAGTTTGTGCCACAAAGGACATCAGCTTACATAAGTCAACATGATAATCACATTGGAGAAATGACTGTGAGAGAAACACTGGCTTTCTCAGCAAGATGTCAAGGGATTGGACACAATTATGAGATCTTGACTGACCTACTTAGAAGAGAGAAGGAAGAAAACATTGAACCAGATCCTGATGTTGATGCATATATGAAGGCAGCAGCACTAGAAGGGCAGCAGAACAGTGTGGTCATTGACTACATACTTAAGATTTTGGGACTTGAATTGTGTGCTGACATTATGGTTGGAGATGAAATGATAAGAGGTATCTCAGGAGGGCAGAAAAAGAGACTCACAACAGGGGAGATGCTGGTTGGACCTATAAGGGTGTTCTTCATGGATGAGATATCAACTGGTTTGGACAGTTCCACAACTTTTCAGATAGTCAACTCTATCCGGCAATCCATCCATATTTTGAATGGAACTGCACTTGTGTCCTTGTTACAGCCAGCACCAGAAACTTATGAACTATTTGATGATATAATATTATTAACAGATGGGCAAATTGTGTACCAAGGTCCAAGAGAAAATGTACTCGAGTTTTTTGAATCAATGGGTTTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAATATTGGGCACATAAAGATGAACCGTATAGCTTTGTCACTGTCAAGGATTTTGCTGAAGCCTTCCAGTCATTTCACATAGGTAAACAACTTGGAGATGAAATGGAAAATCCTTTTGACAAGTCTAAGTGCCATCCAAATGCATTGACCACAAAGAAGTATGGTGTTAACAAGAAAGAGCTGTTGAGGGCTTGTGCTAGCAGAGAATTTTTGCTTATGAAGCGAAATTCCTTTGTCTACATATTCAAAGCCACACAACTTACTTATTTAGCTATCTTGACAACAACACTATTTCTCCGAACCAAGATGAGTCACTATACCAAGGCAGATGCAGAAACTTACATGGGTGCTCTATTCTTCACAGTCACTGTTGCAATGTTCAATGGAATATCAGAACTGAATATGACCATCATGAAACTTCCTGTCTTTTACAAGCAAAGAGACCACCGCCTTTATCCTTCATGGGCTTATTCTCTTCCACCATGGATCCTCAAAATACCATTAACCCTTGTAGAGGTTTCCATCTGGGAATGTATCTCTTATTATGCCATTGGCTATGATCCAAATATTGTCAGGTTTGTAAAACAATACTTGGTAATCTTTTGCGTTAACCAGATGGCATCAGCACTGTTTCGGTTGATGGCTGCAATAGGAAGGGATATTGTCGTGGCAAACACTGCTGGCACATTTGCACTTCTTGCAGTTACAGTTCTCGGAGGATTTGTGATTTCAAGAGAGGATGTGCACAAATGGTTTCTGTGGGGTTACTGGTCCTCACCAATGATGTATGGACAAAATGCTATAGCTGTGAATGAGTTTCTTGGGCATAGCTGGAGAAAGGTTAGTCCTAATTCCAATGAAACATTGGGAGTATTGATACTGAAATCTCGTGGATTTTTCCCACAAGCGTATTGGTATTGGATTGGAATAGGAGCTTTGATTGGTTATGTTTTTCTCTTCAACTTTCTCTTCACCCTGGCTTTGCAATATCTCAGTCCATTCAGAAAGGATCAAGCAGGGCTATCCGAAGAGAAGTTGCTCGAGAGAAATGCTTCAATGGCTGAAGAGTTCATTCAGTTACCAACAAGAAAGAATTCTTCTGATACAAAGATGGACAAAGAAGCAAGTCCATCATCCAGGCCCTCTTCTGGAGAAGTTGATAAAAACAACAAAGCTAGTGATAGTGGAAGGAGAGGCATGGTTCTTCCTTTTCAACCTCTATTCCTCACTTTTGACGAGATAAGATATTCTGTAGACATGCCACAGGAAATGAAAAGTCAAGGAATCAGTGAGCATCGTCTTGAACTTCTGAAAGGTATTAATGGTGCTTTTAGGCCAGGGGTGCTAACAGCTCTGATGGGTGTAAGTGGTGCTGGCAAGACTACTCTACTGGATGTTCTGTCTGGAAGGAAAACAAGTGGATACATTGAAGGAAGCATCACAATATCCGGATACCCAAAGAAACAAGAAACATTTGCTCGCATATCAGGATATTGTGAACAACTTGATATCCACTCACCCAATGTTACAGTTTTTGAGTCCTTGCTATACTCAGCATGGCTTCGTTTATCTCCAGAAGTTGATAAAGAAACTAGAAAGATGTTCATTGAGGAAGTTATGGAACTTGTAGAGCTTAATTCATTAAGAGAAGCACTTGTTGGATTGCCAGGACAGACTGGATTGTCAACTGAACAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCCAACCCATCAATAATTTTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTGATGAGAACTGTGAGGAACACTGTGGACACAGGTAGAACTGTGGTGTGCACCATCCACCAGCCAAGTATCGATATATTTGACGCCTTTGATGAGCTGTTACTTCTGAAATTGGGAGGGGAGCAGATATATTCTGGTCCAATTGGCAGCAACTCTTCCCATCTGATCCAGTACTTTGAGTCTGTTCAAGGAGTTCCTCAGATCAAAGATGGTTATAATCCAGCAACCTGGATGTTGGAAGTCACATCAGCGGCAAAAGAGGCAAGCCTTAAGATTGACTTCACAGATGTGTACAAAAATTCAGAACTACACAGGAGAAATAAAAGAGTGATTCAGGAGCTTGGTGTACCATGTCAAGGTTCAAGAGATCTATATTTTCATAGTCAGCATTCACAGAGTTTCATGGCACAACTCTTAGCGTGCCTATGGAAACAACACTTGTCATATTGGCGGAACACATCATATACTGCAGTTAGACTCCTATTTACCACAACAACAGGCTTATTGTTTGGACTGATATTTTTGAACGTTGGCTTGAAAAGGAAAAAGGAACAAGATCTTTTTGATGCAATGGGTTCAATGTATGCTGCTGTTACCTTCATTGGGGTTGTAAATGGTGCCTCAGTGCAGCCTATAGTAGCAATTGAGAGAACAGTCTTCTACAGGGAGAGAGCTGCAGGAATGTATTCTGCTTTACCATATGCTATTTCACAGGTTATTATAGAGCTTCCCCACATCTTGGTTCAGGCTCTGATATATGGTATCATAGTATATGCCATGATGGGATTTGAATGGACAGCATCAAAGGTGTTCTGGAACCTCTACTACACCTACTTCAGTTTCTTATACTACACTTTCTATGGTATGATGACCATGGCCATAACTCCTAACCCACACATTGCTGGCATATTGTCCACCTCATTCTATGCAGTATGGTGCCTTTTCTCAGGCTTCATCATTCCCTTATCGAGAATACCAATATGGTGGAAATGGTACTATTGGATTTGCCCTGTTGCATGGACCTTGTATGGATTGGTGGCTTCCCAATATGGAGATGACATGAACACACTTGAGAATGGATTAAGGGTTGAAGAATTTGTGAAGAGTTATTTTGGGTTTGAACATGATTTTCTTGGAGTAGTTGCAGTTGTGGTGGCTGGTTTCTCAGTTTTGTTTGCACTTATTTTTGCATTTGGAATCAAAGTGTTCAACTTCCAAAAACGATGA 4353 0.4114 MRSMESSETRRVEGQRGRGFDMWRNHCMGVFSTSEREEDEETLKCVAIERLLARACTKRSVLNQVEGKAEEVDIKQLELSERKSLLERLVKIAEEDNERFLLKLRERMNRVGLEIPTIEVRFEHINVEAQVYVGSRALPTLLNFFVNVLEGLLNSLHMIKSPKKPLHILQNVSGIIKPKRMALLLGPPGSGKTTLLLALAGRLGKDLKHSGRVTYNGHGLEEFVPQRTSAYISQHDNHIGEMTVRETLAFSARCQGIGHNYEILTDLLRREKEENIEPDPDVDAYMKAAALEGQQNSVVIDYILKILGLELCADIMVGDEMIRGISGGQKKRLTTGEMLVGPIRVFFMDEISTGLDSSTTFQIVNSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGVADFLQEVTSRKDQWQYWAHKDEPYSFVTVKDFAEAFQSFHIGKQLGDEMENPFDKSKCHPNALTTKKYGVNKKELLRACASREFLLMKRNSFVYIFKATQLTYLAILTTTLFLRTKMSHYTKADAETYMGALFFTVTVAMFNGISELNMTIMKLPVFYKQRDHRLYPSWAYSLPPWILKIPLTLVEVSIWECISYYAIGYDPNIVRFVKQYLVIFCVNQMASALFRLMAAIGRDIVVANTAGTFALLAVTVLGGFVISREDVHKWFLWGYWSSPMMYGQNAIAVNEFLGHSWRKVSPNSNETLGVLILKSRGFFPQAYWYWIGIGALIGYVFLFNFLFTLALQYLSPFRKDQAGLSEEKLLERNASMAEEFIQLPTRKNSSDTKMDKEASPSSRPSSGEVDKNNKASDSGRRGMVLPFQPLFLTFDEIRYSVDMPQEMKSQGISEHRLELLKGINGAFRPGVLTALMGVSGAGKTTLLDVLSGRKTSGYIEGSITISGYPKKQETFARISGYCEQLDIHSPNVTVFESLLYSAWLRLSPEVDKETRKMFIEEVMELVELNSLREALVGLPGQTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYSGPIGSNSSHLIQYFESVQGVPQIKDGYNPATWMLEVTSAAKEASLKIDFTDVYKNSELHRRNKRVIQELGVPCQGSRDLYFHSQHSQSFMAQLLACLWKQHLSYWRNTSYTAVRLLFTTTTGLLFGLIFLNVGLKRKKEQDLFDAMGSMYAAVTFIGVVNGASVQPIVAIERTVFYRERAAGMYSALPYAISQVIIELPHILVQALIYGIIVYAMMGFEWTASKVFWNLYYTYFSFLYYTFYGMMTMAITPNPHIAGILSTSFYAVWCLFSGFIIPLSRIPIWWKWYYWICPVAWTLYGLVASQYGDDMNTLENGLRVEEFVKSYFGFEHDFLGVVAVVVAGFSVLFALIFAFGIKVFNFQKR* 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0558 1450 Pfam ABC transporter 169 351 IPR003439 GO:0005524
Pvu1g0558 1450 Pfam ABC transporter 881 1033 IPR003439 GO:0005524
Pvu1g0558 1450 Gene3D - 867 1100 IPR027417 -
Pvu1g0558 1450 MobiDBLite consensus disorder prediction 807 842 - -
Pvu1g0558 1450 Pfam ABC-2 type transporter 384 435 IPR043926 GO:0140359
Pvu1g0558 1450 Pfam ABC-transporter N-terminal 73 144 IPR029481 -
Pvu1g0558 1450 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 21 1450 - -
Pvu1g0558 1450 CDD ABCG_PDR_domain2 850 1088 IPR034003 -
Pvu1g0558 1450 PANTHER ATP-BINDING CASSETTE TRANSPORTER 21 1450 - -
Pvu1g0558 1450 SMART AAA_5 178 403 IPR003593 -
Pvu1g0558 1450 SMART AAA_5 890 1082 IPR003593 -
Pvu1g0558 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 426 IPR027417 -
Pvu1g0558 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 877 1090 IPR027417 -
Pvu1g0558 1450 Pfam ABC-2 type transporter 505 717 IPR013525 GO:0016020|GO:0140359
Pvu1g0558 1450 Pfam ABC-2 type transporter 1179 1392 IPR013525 GO:0016020|GO:0140359
Pvu1g0558 1450 Pfam Plant PDR ABC transporter associated 722 783 IPR013581 -
Pvu1g0558 1450 Gene3D - 154 460 IPR027417 -
Pvu1g0558 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 153 426 IPR003439 GO:0005524
Pvu1g0558 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 853 1105 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0558 Pvu-Chr1 6239684 6250250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0558 891 1065 Calmodulin-binding Proteins AT2G36910 25.543 7.32e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0558 K08711 - gmx:100800368 2524.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0986 9 14783488 14791038 Pvu1g0558 1 6239684 6250250 PCT