Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0545 ATGGAACCGTTCGGAGGAATTATTCAAGATTTCAGAGGAAGGGTTGCATGTTACAAACATGATTGGACCAGTGCATTCCGTTCTGGCATTAAGATTCTGGCTCCAACTTTCTACATATTCTTCGCCTCAGCTCTTCCTGTTATTGCTTTTGGAGAGCAACTTAACAGGGATACAGGTGGAAGCTTGAGTACAGTAGAAACATTGACATCAACTGCTATTTGTGGAATTATCCATTCAATATTTGGTGGTCAACCTTTGTTGATTTTGGGAGTTGCTGAACCAACTGTTATAATGTACACTATTCTCTATCAGTTCTGCACAAAAAGTCCAGATCTAGGTGTTGAGTTGTTTCTGCCTTGGGCTGGCTGGGTTTGTGTGTGGACATCTTTGTTGCTGATTATGCTTGCAGTTTTCAATGCCTGCACAATTATCTCGAGGTTCACAAGACTCGCAGAGGAATTATTTGGCATGTTAATTACTGTCCTTTTCTTCCAAGAGGCTATACTGGGAATCAGGAATGAGTTCAAGACACCGAAATCTGAAAATCCTTCTACAGAGGAACATCAATTCCATTGGCGGTATATAAATGGACTACTTTCTGTCATTTTCTCTTTGGGAATACTTCTCACTGCCCTGATGAGTAGAAGAGCAAGAACATGGAAACTTGGAACAGGGTGGCAACGAGCTCTCGTTGCAGATTATGGGATTCCACTGATGGTTGTGTTTTGGACTGGAATGTCATATACTGTACCAAGCAAAGTTCCATCTACGATTCCTAGAAGGCTGGTTTGTCCACTTCCCTGGGAATCTGAGTCTCTCTACCACTGGACAGTAATAATGGATATGGGAAAGGTACCCGTGCTTTACATCTTTGCAGCATTTATTCCAGCTGTGATGGTAGCAGGTTTATACTTCTTTGATCATAGTGTTGCTTCTAAGATGGCTCAACAGAAGGAATATAATCTTCAAAAACCATCTTCTTTCCACTATGATATGTTCCTTCTTGGTATAATGACTCTGATTTGCGGTTTACTTGGCCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCCCCCATGCACACAAAGAGTTTGGCAGTTCTTAGGACTCAGTTGATCCGAAAGAAAGTGGTAAAAAGTGCCAAGGATTGCATTAAACAACAAGGAAACACCACTGAATTATATGGAAAGATGCAAGCTGTGCTTATAGAAATGGATTCTGAACCAAGTACTAAAACAATGACGAATTTGAAGGAGGCTGTGATGAAATCTTCCGAAAATAATGGTGAAAATCCAAAATTTGATCCTGAGAAACACATTGATGCCTATATACCTGTCCGTGTTAATGAGCAAAGAGTCAGTAACTTATTACAGTCTCTCCTGATTGGCCTATCAATTTTTTCCATTTCTGTCATCAAAACGATTCCTACTTCAGTTCTGTGGGGATATTTTGCATACATGGCTATTGATAGTCTTCCAGGGAATCAATTCTATGAAAGGATATTGCTTCTCTTCGTCTCACAAAGCCGGCGCAAAAAAATTTTGGAAGGTCCTCATGCCTCATTTGTGGAATCAGTGCCATTCAAGACCATAGCCATATTCACAATCTTGCAGTGTGCATACTTTTTAGTGTGTTATGGGGTGCAATTGATACCTATTGGAGGAATACTTTTCCCATTACCTTTCTTCCTTCTCATATTTATAAGAGAGCATGTGCTTCCACTCATATTCAATCATGCTGATCTTCACGAACTAGATGCTGCTGAGTACGAGGAAATTCTTGGAGTTCCAAATACGCACAAAAATCCAGAAGATGATGATGATGATGATTACAACGCAGAGCTATTGGATGAGATGACAACTCACAGGGGAGAATTAAAGCTTAGAACTGTAACCCTAAAGAAAAGAACCCCCGTTGAAGACCCCATGCAACAAATAAATATTTATGAATAA 1950 0.4026 MEPFGGIIQDFRGRVACYKHDWTSAFRSGIKILAPTFYIFFASALPVIAFGEQLNRDTGGSLSTVETLTSTAICGIIHSIFGGQPLLILGVAEPTVIMYTILYQFCTKSPDLGVELFLPWAGWVCVWTSLLLIMLAVFNACTIISRFTRLAEELFGMLITVLFFQEAILGIRNEFKTPKSENPSTEEHQFHWRYINGLLSVIFSLGILLTALMSRRARTWKLGTGWQRALVADYGIPLMVVFWTGMSYTVPSKVPSTIPRRLVCPLPWESESLYHWTVIMDMGKVPVLYIFAAFIPAVMVAGLYFFDHSVASKMAQQKEYNLQKPSSFHYDMFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLRTQLIRKKVVKSAKDCIKQQGNTTELYGKMQAVLIEMDSEPSTKTMTNLKEAVMKSSENNGENPKFDPEKHIDAYIPVRVNEQRVSNLLQSLLIGLSIFSISVIKTIPTSVLWGYFAYMAIDSLPGNQFYERILLLFVSQSRRKKILEGPHASFVESVPFKTIAIFTILQCAYFLVCYGVQLIPIGGILFPLPFFLLIFIREHVLPLIFNHADLHELDAAEYEEILGVPNTHKNPEDDDDDDYNAELLDEMTTHRGELKLRTVTLKKRTPVEDPMQQINIYE* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0545 649 Gene3D Helical hairpin bin 14 56 - -
Pvu1g0545 649 Pfam HCO3- transporter family 3 178 IPR011531 GO:0006820|GO:0016021
Pvu1g0545 649 Pfam HCO3- transporter family 185 369 IPR011531 GO:0006820|GO:0016021
Pvu1g0545 649 Pfam HCO3- transporter family 445 536 IPR011531 GO:0006820|GO:0016021
Pvu1g0545 649 PANTHER ANION EXCHANGE PROTEIN 2 636 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pvu1g0545 649 PANTHER BORON TRANSPORTER 6-RELATED 2 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0545 Pvu-Chr1 6121327 6127178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0545 3 637 Antiporters AT5G25430 62.673 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0545 K24194 - gmx:100808880 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0545 1 6121327 6127178 Pvu1g0545 1 6121327 6127178 ECH
Pvu9g0982 9 14746745 14752614 Pvu1g0545 1 6121327 6127178 ECH
Pvu1g0545 1 6121327 6127178 Pvu9g0982 9 14746745 14752614 PCT