Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0536 ATGGCGGCCTCTCGTCCGCAGACGCCACAATCCACCGCGTCAAGCATTATTCCGCTGCTGCACCAATCCCAGTTTCTCCACGATCAAGCTTTCCTCCAACGCCGATTACAGATGATATTTGAAGGTGCCAGAGAGAGGTGGATGTATGCAATTTACTGGGTGTACTCCCCTGCCGATTCCCTTCTCTGTTGGGGTGACGGCTATTACAACGGCAATGGCAAACCCCAAAAAACGACGTGGCCCACAGAGCAGGCCCAGCGCAAGAGCGTTCTTAAGTTACTTAATAGCTTAATTTCAGGCCCCTCGGCCACCCATGACGACTGCGACGAAGACGTCACTGATCCAGAGTGGTTATTTTTGCTCTCCACGACTTACACCTTTGTCAACGGCAGCGGCTTATCTGAATCGGCCTGCCAACGGGCCTGGCAGTTGCAGCAGTTTGGGCTTCAGACGATGGTTTGCATACCGTGTCCAAACGGCGTCGTTGAACTGGCCTCCTCTGAAGTGCTTCTGCCCAACCCTGTTCTCGTGATTAAAGTCCTAGCATTGATCAACCTCAACGGCCCAGTCGCGGACCTCACCTCTGCCGAAATCATACGACCACGGGAAGATAAAAGGTTGTATGAAAGAGGAAGTATGGAGATGCAACAAAATCATGAAAACGGGAACTTGTCTAAGCAATCTCGAGGGAAAGAAAAGGAAAGTGATTCAAAATGCTCATGGTCCTTGTTATCAGGAACTTCCGATGGAGGCTCTGAAAGCACATATTCACATTCGAACGACTATTCTGGCCCCTCGCGAATTTACCATGTATTATTTTCATTGATGAAAGCTTTTAACTTCATCAATGAGGAAGCACAAAATTATCTTAATATTGTTGGGAATATGAAGACAAGAAACTCAGTAAACTAG 912 0.4814 MAASRPQTPQSTASSIIPLLHQSQFLHDQAFLQRRLQMIFEGARERWMYAIYWVYSPADSLLCWGDGYYNGNGKPQKTTWPTEQAQRKSVLKLLNSLISGPSATHDDCDEDVTDPEWLFLLSTTYTFVNGSGLSESACQRAWQLQQFGLQTMVCIPCPNGVVELASSEVLLPNPVLVIKVLALINLNGPVADLTSAEIIRPREDKRLYERGSMEMQQNHENGNLSKQSRGKEKESDSKCSWSLLSGTSDGGSESTYSHSNDYSGPSRIYHVLFSLMKAFNFINEEAQNYLNIVGNMKTRNSVN* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0536 303 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 136 180 IPR025610 -
Pvu1g0536 303 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 32 134 IPR025610 -
Pvu1g0536 303 MobiDBLite consensus disorder prediction 213 261 - -
Pvu1g0536 303 PANTHER MYC 133 202 IPR045084 GO:0003700|GO:0006355
Pvu1g0536 303 PANTHER MYC 27 134 IPR045084 GO:0003700|GO:0006355
Pvu1g0536 303 PANTHER TRANSCRIPTION FACTOR MYC2 133 202 - -
Pvu1g0536 303 PANTHER TRANSCRIPTION FACTOR MYC2 27 134 - -
Pvu1g0536 303 MobiDBLite consensus disorder prediction 239 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0536 Pvu-Chr1 5974746 5976132 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0536 23 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 41.176 4.89e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0536 K13422 - pvu:PHAVU_001G052400g 620.542