Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0534 ATGGCGGCCTCTCGTCCGCCGACGCCACAATCCACCGCGTCAAGCATTATTCCGCTGCTGCACCAATCCCAGTTTCTTCCCGATCTAGCTACCCTCCAACGGCGATTACAGATGATATTTGAAGGTGCTAGAGAGAGGTGGGTGTATGCAATTTACTGGAGGTACTCCCCTACCGATTCCCTTTTCTGTTGGGGTAACGGCTATTACCACGACAATAGCAAAGTCCAAAAAACGACGTCGCCCACAGAGCAGGCCCAGCGCAAGAGCGTTTATAGGTTATTCAGATTCTTAACTTCAGGCCCCTCGGCCACCCATAATTACTGCGACCAAGACGTCACTGATCCAGAGTGGTTGTTTTTGCTCTCCCCTAGTCACACCTTTGTCAACGGCAGCGGCATGCTGGGCCAGGCTTTCTTTCATCCGAGAACGGTTTGGCTCACCGGGTCAGCCCAGTTATCTGAATCGGCCTGCCAACGGGCCAGGCAGTTACAGCAGTCTGGGCTTCAGACGATGGTTTGCATACCGTGTCCAAACGGCGTCGTTGAACTGGCCTCCTCCGAAGTGGTTCTGCCCAACCCTGATTTCGTGATCAAAGTGCGAGATTTGTTCAACTTCAACGACCCACTCGCGGACCTCACCTCCGCCGAAATCATACGACCACGGGAAGATAAATGGTTGCATGAAAGAGCAAATATTGAGATGCAAAATCATGAAAACGAGAACTTGTCTAAGCAATCTCGAGGAAAAGAAAAGGAAAGTGATTCAAAAGGCTCATGGTTCTTGTTGTCAGGAAGTTCCAATGGAGACTCTCATACCACACGTTCCCATTCTAACGACTATCCTGGCCCCTCCTGGATTTAA 861 0.5075 MAASRPPTPQSTASSIIPLLHQSQFLPDLATLQRRLQMIFEGARERWVYAIYWRYSPTDSLFCWGNGYYHDNSKVQKTTSPTEQAQRKSVYRLFRFLTSGPSATHNYCDQDVTDPEWLFLLSPSHTFVNGSGMLGQAFFHPRTVWLTGSAQLSESACQRARQLQQSGLQTMVCIPCPNGVVELASSEVVLPNPDFVIKVRDLFNFNDPLADLTSAEIIRPREDKWLHERANIEMQNHENENLSKQSRGKEKESDSKGSWFLLSGSSNGDSHTTRSHSNDYPGPSWI* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0534 286 PANTHER TRANSCRIPTION FACTOR MYC2 29 224 - -
Pvu1g0534 286 MobiDBLite consensus disorder prediction 236 286 - -
Pvu1g0534 286 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 32 203 IPR025610 -
Pvu1g0534 286 PANTHER MYC 29 224 IPR045084 GO:0003700|GO:0006355
Pvu1g0534 286 MobiDBLite consensus disorder prediction 236 256 - -
Pvu1g0534 286 Coils Coil 227 252 - -
Pvu1g0534 286 MobiDBLite consensus disorder prediction 258 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0534 Pvu-Chr1 5929207 5930673 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0534 31 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 43.500 1.97e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0534 K13422 - pvu:PHAVU_001G052400g 409.068