Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0533 ATGGATTCTGAAATGCTGAAGTCATTAGCCCTTCTCTTTTCCTTTCTCCTCTCCATGATTGTGGCACTGAAACTAGGGAGAAACCTTAAGAAAACTGAGTCATCTCTAAACATACCCCCTGGACCATGGAAGCTGCCTGTTATAGGAAACATACACCATCTTCTTTCATCCACACCACACCGAAAATTAAGAGACTTGGCCAAAATATATGGACCCTTGATGCATCTCCAACTAGGAGAGATCTTCATAATCGTTGTCTCTTCATCAGAGTATGCTAGAGAAATCATGAAAACCCATGATGTAATCTTTGCATCAAGGCCTCAACTTCTAGCCGCAGAAATAGCCACCTATGGATACACAAACATTGCTTTTGCACCTTATGGGAGTTACTGGAAAAAGGTGAGAAAAATATGCACCATGGAGCTTTTCTCCCCAAAACGTATCAACTCATTCCAACCAATCAGAGAAGAAGAACTCAGCAATCTGGTTAAAGTGGTTGGTTCACACGATGAAGGGTCCCCCATCAACCTCACTCAAGCAGTGCTCTCATCATTGTATAACATCATTTCAAGAGCTGCTCTTGGCAAGAAGCGCAGCAAAGACCAAGATGAATTCATGACAATACTCGAAGAAGGAGTGCTTGCTTCAGGAGGTTTTGACATAGGAGAGATGTTTCCTTCTGCTAAATGGCTTCAACGTGTTACTGGTCTGAGGCCTATGCTTGAGAAGGTGCATAGAAAAATGGATCGGATACTAGAAGACATCGTCAATGAACACAGAGAAGCAAGATCCAAAGCCAAAGAAGGCCATGAATCAGAGGAAGATTTGGTAGATGTTCTCCTAAAGTTCTATGATGGTAATAATCAAAGTAACCAAGACATTTGCTTAACCCTTAACAATATCAAAGCAGTAATCATGGACATTTTTGCTGCTGGAGTTGAGCCTGTGGCAACTACCATAAATTGGGCACTGGCAGAGATGATAAGGAATCCAAGAGTTATGAAGAAAGCACAAGATGAGGTGAGAGAGGTATTCAGTGAAAAGGGAAGGGTTGATGAGATTTGCATGAATGAACTAAAATATTTGAAATCAGTTGTGAAAGAAACCCTAAGGCTACACCCACCAGCTGTTTTTGTGGTTCCAAGAGAATGTGGAGAGACATGTGAGATTGATGGGTATGATATACCAGTAAAAAGCAAGGTGTTGATCAATGCTTGGGCACTTGGAAGAGATCCAAAGTACTGGAGTGAAGCAGAGAGGTTTTATCCAGAGAGATTCATTGATAGCTCTATTGATTATAAAGGGAGTCATTTTGAGTACATTCCCTTTGGTGCTGGAAGAAGAATGTGTCCAGGCATTTCCTTTGGTTTGTTAAATGTTGAACTCACACTTGCAGTTTTGTTGTTTCACTTTGATTGGAAGCTTCCAAATGGAGTGAAAACTGAGGACTTCGACATGACTGAGAAATTTGGAGTCACTGTCGGAAGAAAGAATGACATATGCTTGATACCTGTGACTTCTCCTCCTTTTGCAGGGAAAGGATGCAAAGAGTAA 1554 0.4131 MDSEMLKSLALLFSFLLSMIVALKLGRNLKKTESSLNIPPGPWKLPVIGNIHHLLSSTPHRKLRDLAKIYGPLMHLQLGEIFIIVVSSSEYAREIMKTHDVIFASRPQLLAAEIATYGYTNIAFAPYGSYWKKVRKICTMELFSPKRINSFQPIREEELSNLVKVVGSHDEGSPINLTQAVLSSLYNIISRAALGKKRSKDQDEFMTILEEGVLASGGFDIGEMFPSAKWLQRVTGLRPMLEKVHRKMDRILEDIVNEHREARSKAKEGHESEEDLVDVLLKFYDGNNQSNQDICLTLNNIKAVIMDIFAAGVEPVATTINWALAEMIRNPRVMKKAQDEVREVFSEKGRVDEICMNELKYLKSVVKETLRLHPPAVFVVPRECGETCEIDGYDIPVKSKVLINAWALGRDPKYWSEAERFYPERFIDSSIDYKGSHFEYIPFGAGRRMCPGISFGLLNVELTLAVLLFHFDWKLPNGVKTEDFDMTEKFGVTVGRKNDICLIPVTSPPFAGKGCKE* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0533 517 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 Gene3D Cytochrome P450 24 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 Pfam Cytochrome P450 39 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 SUPERFAMILY Cytochrome P450 39 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g0533 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Pvu1g0533 517 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 508 - -
Pvu1g0533 517 PANTHER CYTOCHROME P450 71B11-RELATED 9 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0533 Pvu-Chr1 5913668 5918090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0533 15 505 Cytochrome P450 AT3G26300 41.082 2.14e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0533 - - gmx:100818508 780.015