Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0522 ATGGGAAAACAGTGGTCTCTCTTCAGTGTTATGGATACCCTTTTGTTGTGTGTCCTTCTTTCGTCTGAAGTAGTTTTGACAAGTATTCTTAAGGTTGGCAAAGTCTATCCGCGGATTGAAGGTTCTCAAATGAATTGGATTGACAAGGATGGCATTTTGCTTGTTTCATACGAAGGAGAATATGGATTTGGCTTTGTCACCACTCCAAATGACACCACATTGTTTCTACTAGCAATACTCCACATGGGCAGCAACAGAATGGTTTGGGTAGCAAATAGGGGTCTTCCTGTTTCCAACTCTGATAAGTTTGTGTTTGATGAGAAGGGCAACCTCTATTTGCTTAAAGGAGCAGCAGTGGTGTGGTCTGCAGGTACAGAAGACAAAGGAGTTTCTTCAATGGAATTGAAAGACACTGGAAACTTGGTTTTGCTAGGGAATGATAGTAGTGTGATTTGGCAGAGTTTCAGCCACCCAACAGATACCTTGTTGCCAATGCAGGACTTCATTGAGGGAATGAAACTTTTCAGTGAACCTGGTCCTAACAACTTGACCTATGTTCTTCAGATTGAATCTGGCAATCCCATTCTCTCCACTGGTCTACAAACTCCACAGCCTTATTGGTCTATGAAGGAGGATAGCCGCAAAAAAATCATCTACAAAAATGGTGATGTGGTGGCTTCAGCTACCATTAATGCAAGCTCCTGGAGCTTCTATGATCAAACTAAATCCTTGTTGTGGCAATTTAATTTTGCTGAAGAATCAGATTCAAATGGCACTTGGATTTTAGTTTTGGGGAGTGACGGCCTCATCACATTCTTCAATCTCCAAAGTGGAGGAGCAACTGTTGCTTCACCAACAAGAATACCACAAGATTCTTGCAGCACCCCAGAACCTTGTGATCCGTATTACATATGCAGTGGTGAAAAAAAGTGTACCTGCCCTTCTGTTCTTAGCTCTAGTCCTAATTGCAAACCCGGGTTTGTCTCTCCTTGCAGCTCAAAAGGCACCATTGAGCTCCTCAAAGCTGATGATCGACTCAATTACTTTGCACTTGGGTTTGTTCCACCCTCTTCGAAGACTGATTTGATTGGTTGCAAAACCTCTTGCAGTGCAAATTGCTCATGCCTTGCTATGTTCTTCAACAGCAATTCAGGGAACTGTTTCCTATTGGACTGGATTGGAAGCTTTGAGAAATCTGTCGAAGACTCTGGTTTAGTGTCCTACATTAAGGTGGTATCTAGAGATGGAGACACTAGAGACAGTGGAAGCAGCACTATGCAGGCAATAGTTGTTGTTATCATTGTGATAGTAACATTGTTTGTCATTTCTGTTATGCTGTTTGTGGCACATAGATGTTTCAGGGAAAAAGAAGATTTGCCTGAGTCTCCTCAAGAGAATTCAGAAGATGACAATTTCTTGGAGGGTTTAACCGGCATGCCAATCCGTTACAGCTACAATGATCTAAAAACTGCAACAAGTAACTTCTCAGTGAAGCTAGGAGAAGGGGGTTTTGGATCAGTTTATAAAGGAGCTGTACCAGATGGTACTCAACTAGCTGTGAAGAAGTTGGAAGGAATTGGCCAAGGGAAGAAAGAGTTCAGGGTTGAAGTTAGCATTATAGGGAGCATTCATCACCACCATTTAGTAAGGCTTAAAGGGTTCTGTGCTGAAGGGTCTCATAGACTTCTTGCTTATGAGTACATGGCCAATGGATCATTGGAGAAATGGATATTCAACAAGAACAGAGAGGGATTTGTGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCTTACCTCCATGAAGATTGTGACTCAAAGATCATCCATTGTGACATCAAACCAGAAAATGTGCTTCTAGATGATAACTTCCTGGTCAAGGTTTCTGATTTTGGCCTGGCTAAGCTCATGACACGTGAACAAAGTCATGCTTTCACAACACTTAGAGGCACTAGAGGGTATCTTGCACCTGAGTGGATCACAAACTGTGCCATATCAGAGAAAAGTGACGTTTATAGCTATGGCATGGTGTTACTAGAGATCATTGGAGGGAGGAAAAACTATGATCCTCGGGAAACTTCAGAGAAAACCAATTTCCCTTCTTTTGCTTTTAAGATGATGGAAGAAGGGAAGGTGAGAGAGATTCTAGACTCAAAGCTAGAAACTAATGAAAATGATGAGAGGGTTCAAACTGCTGTAAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCTTTGAGGCCTACCATGACCAAAGTTGTCCAAATGCTAGAGGGTCTATGCACTGTTCATAAGCCACCAAGTTGTTATGTCCCTGGTTCTCAGTTTTACTCAAATAGTGATGCTGGCACTTCTTCAGGACCATCAGATTGTAACAGTGATGCCAATCTTTCTGCTGTCAGGCTTTCAGGGCCAAGATAA 2439 0.4215 MGKQWSLFSVMDTLLLCVLLSSEVVLTSILKVGKVYPRIEGSQMNWIDKDGILLVSYEGEYGFGFVTTPNDTTLFLLAILHMGSNRMVWVANRGLPVSNSDKFVFDEKGNLYLLKGAAVVWSAGTEDKGVSSMELKDTGNLVLLGNDSSVIWQSFSHPTDTLLPMQDFIEGMKLFSEPGPNNLTYVLQIESGNPILSTGLQTPQPYWSMKEDSRKKIIYKNGDVVASATINASSWSFYDQTKSLLWQFNFAEESDSNGTWILVLGSDGLITFFNLQSGGATVASPTRIPQDSCSTPEPCDPYYICSGEKKCTCPSVLSSSPNCKPGFVSPCSSKGTIELLKADDRLNYFALGFVPPSSKTDLIGCKTSCSANCSCLAMFFNSNSGNCFLLDWIGSFEKSVEDSGLVSYIKVVSRDGDTRDSGSSTMQAIVVVIIVIVTLFVISVMLFVAHRCFREKEDLPESPQENSEDDNFLEGLTGMPIRYSYNDLKTATSNFSVKLGEGGFGSVYKGAVPDGTQLAVKKLEGIGQGKKEFRVEVSIIGSIHHHHLVRLKGFCAEGSHRLLAYEYMANGSLEKWIFNKNREGFVLDWDTRYNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDNFLVKVSDFGLAKLMTREQSHAFTTLRGTRGYLAPEWITNCAISEKSDVYSYGMVLLEIIGGRKNYDPRETSEKTNFPSFAFKMMEEGKVREILDSKLETNENDERVQTAVKVALWCIQEDMSLRPTMTKVVQMLEGLCTVHKPPSCYVPGSQFYSNSDAGTSSGPSDCNSDANLSAVRLSGPR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0522 812 CDD B_lectin 47 158 IPR001480 -
Pvu1g0522 812 MobiDBLite consensus disorder prediction 787 812 - -
Pvu1g0522 812 Gene3D Phosphorylase Kinase; domain 1 461 567 - -
Pvu1g0522 812 PIRSF SRK 8 809 IPR024171 GO:0004674
Pvu1g0522 812 ProSiteProfiles Bulb-type lectin domain profile. 38 156 IPR001480 -
Pvu1g0522 812 SMART serkin_6 493 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0522 812 Gene3D - 48 157 IPR036426 -
Pvu1g0522 812 CDD STKc_IRAK 499 766 - -
Pvu1g0522 812 SMART blect_4 45 158 IPR001480 -
Pvu1g0522 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Pvu1g0522 812 Gene3D Transferase(Phosphotransferase) domain 1 568 772 - -
Pvu1g0522 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 812 - -
Pvu1g0522 812 ProSiteProfiles Protein kinase domain profile. 493 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0522 812 SUPERFAMILY Protein kinase-like (PK-like) 475 764 IPR011009 -
Pvu1g0522 812 ProSitePatterns Protein kinases ATP-binding region signature. 499 522 IPR017441 GO:0005524
Pvu1g0522 812 Pfam Protein kinase domain 496 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0522 812 MobiDBLite consensus disorder prediction 787 805 - -
Pvu1g0522 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 812 - -
Pvu1g0522 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 209 IPR036426 -
Pvu1g0522 812 Pfam D-mannose binding lectin 87 167 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0522 Pvu-Chr1 5689506 5692664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0522 471 773 Receptor kinase-like Gene Family AT5G20050 48.113 8.50e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu1g0522 Pkinase 4.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0522 - - gmx:100787500 1413.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0522 1 5689506 5692664 Pvu9g0953 9 14348559 14351391 PCT