Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0518 GTTCTCTCACTTCTCTTGCTCCATTTTTTTCTGTTTATCCGAGATTCCATTGCAGGTTCAAGGATGTCTAAAGAAGTTATTGATGCTCCTTCAGCTGCTCCTTTTGAGTTTGAGATCTTGGATAGTGATTCTGAAATTGTTAGATCTGTTAGAGACTCATCCAAACGTGCAAATCCATGGATTGAACCTGAAAGGCTGAAACTTAGACACAGAATTGGCCGAGGCCTCTTTGGTGATGTTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGATGAGTATCATGAAGTTGCTGCTAAGATGTTACATACAATTGAAGAGGATCTTATGAAGTTTGTTATAGAGAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCCAGCATGTCCTGGCTGCATGGAATTTCAATCTTAAACGGAAGGCTATGCATCATTATGAATTTGTATGAGGGTTCAATTGGTGACAAGATGGCGGGACTCAAAGAAGGAAGGATTTCATTGCATGATGTTTTAAGGTATGGAATCAATCTGGCTCAAGGTGTTCTGGAACTTCACTCTCTAGGGATCCTCATTCTTAACCTTAAACCATTCAATGTTATTCTCAATGAGAACGATCAAGCAATTTTGGGAGATGTTGGAATTCCTAGTCTTTTGCTTGACTCCTCATTCCTAAGCACAGATATGGATAATAAGAGGCTTGGAACACCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGTCCTATATCGTTTGAAACAGATTCTTGGGGATTCGGTTGCACCATTGTCGAAATGTTGACTGGTAATCAGCCTTGGTTTGGGTGTCCTGTTGGCAGAATATACCAGTCAGTTGTTGAAAAGCATGAAAAACCCAATATTCCCAATGGCCTTCCTTCTTCAGTTGAGAATATCCTCAGTGCATGCTTTGAGTATGATTTGAGGAATCGCCCCTTAATGGTGGATATTCTGAGTGTCTTTCAAAGTGCTCTGAATGAATTGGCCAATGATGGAGAATGGAGATATCTAGGAAATGTGAAAGTTAATCCAAAATCAGATAGCACTGTCTACACAGAGTGGTTCCTCTCCAAGGATCATCTTCAGGTGGGCGACATGGTCCGAACTAGAAAGCTTACCAATTCATGCAAACCTCAAAACATGGACATCCCAGAAGGAACTGTTGTTAGTTTAGAGTGTAATACAGATCACAAGTTCGCCCTTGTGAGGGTCCATGGCAATGACGACCCTATTAGATTTCATATATCATCCCTTGAACGTGTCACATCTGGCTTGGTAGCAGGTGATTGGGTACACTTAAGGGATGAAAACGAGAAGCACTCACCTGTGGGCATTATACATTCCATCAACCGAGACGGTAGTGTATCTGTTGGATTTCTTGGGCTGCGAGCTATATGGGAAGGAAACTCTTTTGAACTCGAAAAGGTGAAACCTTACCGTGTTGGCCAGTTTGTCAGGCTGAAAGACACTGTTTCAAGTCCTCGGTTTGAGTGGTGTCGCAAAAAGGGTTCTGCCGGGGCTGCTGGCAGGATCTCATGGATTTTTCCAAATGGAGGTTTGGTTGTGAAGTTCCCAGGGATGCTTCCTTTTGGTAATGAAGCAAACACCTACTTGGCTGATCCCTCTGAGGTTGAAGTGGTTGAGTTCAGGACTTGTCCTGGGATCATAGAAAAGTATCAACATGTAGAGGATCATCACTGGGCAATTAGACCAGTTCTAGTTGCATTTGGTCTATTCACTGCTTTCAAATTTGGCATACTTGTGGGAAAGAAAGTGAGGAGGAACAACAAGGTGAATGCAGTAGAGATTGGAAGTCTTATTGGTCAAAATCAAAATGCCAACTCTGCTACAACAACTACTACCACTACAACGAGATCTCCAATTTTACAAAACAAGGCAGGGCAACATGGGTTCATGCAGATGCTAATCTAA 1962 0.4215 VLSLLLLHFFLFIRDSIAGSRMSKEVIDAPSAAPFEFEILDSDSEIVRSVRDSSKRANPWIEPERLKLRHRIGRGLFGDVWLATHHQSTEDYDEYHEVAAKMLHTIEEDLMKFVIEKFNELYFKCQGVASMSWLHGISILNGRLCIIMNLYEGSIGDKMAGLKEGRISLHDVLRYGINLAQGVLELHSLGILILNLKPFNVILNENDQAILGDVGIPSLLLDSSFLSTDMDNKRLGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWFGCPVGRIYQSVVEKHEKPNIPNGLPSSVENILSACFEYDLRNRPLMVDILSVFQSALNELANDGEWRYLGNVKVNPKSDSTVYTEWFLSKDHLQVGDMVRTRKLTNSCKPQNMDIPEGTVVSLECNTDHKFALVRVHGNDDPIRFHISSLERVTSGLVAGDWVHLRDENEKHSPVGIIHSINRDGSVSVGFLGLRAIWEGNSFELEKVKPYRVGQFVRLKDTVSSPRFEWCRKKGSAGAAGRISWIFPNGGLVVKFPGMLPFGNEANTYLADPSEVEVVEFRTCPGIIEKYQHVEDHHWAIRPVLVAFGLFTAFKFGILVGKKVRRNNKVNAVEIGSLIGQNQNANSATTTTTTTTRSPILQNKAGQHGFMQMLI* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0518 653 SUPERFAMILY Protein kinase-like (PK-like) 63 332 IPR011009 -
Pvu1g0518 653 Pfam Protein tyrosine and serine/threonine kinase 66 329 IPR001245 GO:0004672|GO:0006468
Pvu1g0518 653 Gene3D Transferase(Phosphotransferase) domain 1 153 363 - -
Pvu1g0518 653 ProSitePatterns Protein kinases ATP-binding region signature. 72 101 IPR017441 GO:0005524
Pvu1g0518 653 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
Pvu1g0518 653 ProSiteProfiles Protein kinase domain profile. 66 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0518 653 PANTHER OS06G0639500 PROTEIN 22 628 - -
Pvu1g0518 653 PANTHER OS06G0639500 PROTEIN 22 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0518 Pvu-Chr1 5643483 5651744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0518 69 329 MAP Kinase Kinase Kinase AT2G32510 27.509 7.29e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pvu1g0518 PK_Tyr_Ser-Thr 1.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0518 - - gsj:114393396 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0518 1 5643483 5651744 Pvu1g0518 1 5643483 5651744 ECH
Pvu9g0947 9 14286831 14290950 Pvu1g0518 1 5643483 5651744 ECH
Pvu1g0518 1 5643483 5651744 Pvu9g0947 9 14286831 14290950 PCT