Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0516 ATGTTTGTCCTAGAAAATGGTGCGAAGAAGGGGGAAGACCCAAGGCTTCAAGCCATCTCCGAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGTTGTTGGATCACAACGCGTTCAAAGACGCGGTTGGCATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCTGGGGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAAGCTGGAAAGCTGCCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGCACTGATTGTTTGGAGTTGCATGTTGGGGCTGTTGAATCCAGTGAACGGGTGATAATTATTGATGATTTGGTGGCCACAGGTGGAACTCTATCAGCAGCAATTAGACTTCTAGAACGTGCTGGTGCTGAAGTGGTGGAGTGTGCTTGTGTGATTGGTCTGTCTGATCTCAAGGTAAGATGCAAGCTTAATGGAAAGCCACTTTATATCCTTTTGGAGCCACGCCAAATAGAGAATGGTTTTTGA 582 0.4381 MFVLENGAKKGEDPRLQAISEAIRVVPHFPKQGIMFQDITTLLLDHNAFKDAVGIFVDRYRDMDISVVAGVEARGFIFGSSIALGIGAKFVPLCKAGKLPGEVISEKYVLEYGTDCLELHVGAVESSERVIIIDDLVATGGTLSAAIRLLERAGAEVVECACVIGLSDLKVRCKLNGKPLYILLEPRQIENGF* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0516 193 CDD PRTases_typeI 64 185 IPR000836 -
Pvu1g0516 193 Hamap Adenine phosphoribosyltransferase [apt]. 19 186 IPR005764 GO:0003999|GO:0005737|GO:0006168
Pvu1g0516 193 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 12 190 - -
Pvu1g0516 193 TIGRFAM apt: adenine phosphoribosyltransferase 20 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Pvu1g0516 193 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 12 190 - -
Pvu1g0516 193 SUPERFAMILY PRTase-like 22 178 IPR029057 -
Pvu1g0516 193 Gene3D - 6 186 IPR029057 -
Pvu1g0516 193 Pfam Phosphoribosyl transferase domain 45 164 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0516 Pvu-Chr1 5618076 5621302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0516 12 185 PRT Gene Family AT1G27450 68.391 8.56e-84 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0516 K00759 - gmx:100775389 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0516 1 5618076 5621302 Pvu1g0516 1 5618076 5621302 ECH
Pvu9g0946 9 14255567 14259536 Pvu1g0516 1 5618076 5621302 ECH
Pvu1g0516 1 5618076 5621302 Pvu9g0946 9 14255567 14259536 PCT