Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0503 ATGTATAATAATATTGAAAATTACCTTCAACAAAATAGTTTGACACCTATTAGATACTCATATAAGGAAATCAAGAAGATGGCTGCAGGTTTCAAAGAGAAGTTAGGTGAAGGAGGATTTGGCTCTGTCTTTAAGGCAAAGTTGTGCAGTGGGCCTTTTGTGGCTATCAAAATGTTAGGCAAATCCAAAACAAATGGACAAGATTTTATCAGTGAAGTTGCGACCATTGGAAGAATACATCATCAAAATGTGGTACGGTTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCTCTTGTTTATGAATTTATGCCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGAGAGAAATATACATTTAAGTTATGAAAAGATATATAATATATCAATTGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGACATCAAACCTCATAACATCTTACTAGATGAAAACTACATCCCTAAGGTTTTTGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGTATCGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAACTATTTTACAAAAATATTGGAGGAATATCCCATAAAGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAGATGGCGAGCAAGAGGAAGAATCTAAATCCCCATGTAGACCACTCAAGTCAACTTTACTTTCCCCTTTGGATTTATGATCATATTAGGAAATGGGAAGATGTAGACATCAAAGATGTGACAGAAGAGGAAAATAAAATAGCAAAGAAGATGATCATAGTTGCACTATGGTGTATACAACTAAAATCAAATGATCGACCCTCAATGAATAGAGTAGTGAAAATGCTTGAAGGGGATATTGAAGACTTAGAAATACCTCCAAAACCTATTTTATTTCCAGAAGATGAAACAATGATAGATGATCAAACAATCAACTCTAACTAG 993 0.3484 MYNNIENYLQQNSLTPIRYSYKEIKKMAAGFKEKLGEGGFGSVFKAKLCSGPFVAIKMLGKSKTNGQDFISEVATIGRIHHQNVVRLIGFCVSGSKRALVYEFMPNGSLDKFIFSKERNIHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENYIPKVFDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMASKRKNLNPHVDHSSQLYFPLWIYDHIRKWEDVDIKDVTEEENKIAKKMIIVALWCIQLKSNDRPSMNRVVKMLEGDIEDLEIPPKPILFPEDETMIDDQTINSN* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0503 330 SMART serkin_6 29 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0503 330 PIRSF ILK 10 307 - -
Pvu1g0503 330 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 321 - -
Pvu1g0503 330 SUPERFAMILY Protein kinase-like (PK-like) 13 300 IPR011009 -
Pvu1g0503 330 Pfam Protein kinase domain 32 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0503 330 Gene3D Phosphorylase Kinase; domain 1 3 103 - -
Pvu1g0503 330 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 321 IPR045874 GO:0004672
Pvu1g0503 330 Gene3D Transferase(Phosphotransferase) domain 1 104 307 - -
Pvu1g0503 330 ProSiteProfiles Protein kinase domain profile. 29 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0503 330 ProSitePatterns Protein kinases ATP-binding region signature. 35 57 IPR017441 GO:0005524
Pvu1g0503 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0503 Pvu-Chr1 5438686 5439678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0503 18 323 Receptor kinase-like Gene Family AT5G38280 50.161 3.66e-109 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0503 Pkinase 6.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0503 - - vun:114195573 568.54