Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0500 ATACTGGAAGAACTATTAATGGATGTAACAGGTTTCAAAGAGAAGTTAGGTGAAGGAGGATTTGGCTCTGTCTTTAAGGCAAAGTTGCGCAGTGGGCCTTTTGTTGCCATCAAAATGTTAGACAAATCCAAAGCAAATGGACAAGATTTTATATGTGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTGGTACAGTTAATTGGATTTTGTGCTAGTGGCTCAAAACGTGCTCTTGTCTATGAATTCATGCCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGAGATAAATATACATTTAAGCTATGAAAAGATATATAATATATCAATCGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAAATTTTGCATTTTGACATCAAACCCCATAATATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCGATAGATAATAGTATTGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAATTGTTTTATAATAATATTGGAGGAATATCTCATAAGGTTGATGTTTATAGCTTCGGAATGTTGTTGATGGAGATGGCAAGTAAGAGGAAGAATCTAAATCCTTATGCAGACCACTCAAGTCAACTTTACTTTCCCCTTTGGATCTATGATCATATTAGGGAAGAGGAAGATGTAGATATCGAAGATGTGACAGAAGAGGAAAATAAAATAGCAAAGAAGATGATCATAGTTGCATTATGGTGTATACAACTAAAACCAAATGATCGACCCTCAATGAATAGAGTAGTGGAAATGCTTGAAGGGGATATTGAAGACTTGGAAATCCCTCCAAAACCTATTCTATTTCCAGATGAAACAGTGACAAAGGAACAAATAATCAACTCTAGCTAG 933 0.3591 ILEELLMDVTGFKEKLGEGGFGSVFKAKLRSGPFVAIKMLDKSKANGQDFICEVATIGRIHHQNVVQLIGFCASGSKRALVYEFMPNGSLDKFIFSKEINIHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYNNIGGISHKVDVYSFGMLLMEMASKRKNLNPYADHSSQLYFPLWIYDHIREEEDVDIEDVTEEENKIAKKMIIVALWCIQLKPNDRPSMNRVVEMLEGDIEDLEIPPKPILFPDETVTKEQIINSS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0500 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pvu1g0500 310 SUPERFAMILY Protein kinase-like (PK-like) 12 281 IPR011009 -
Pvu1g0500 310 Pfam Protein kinase domain 13 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0500 310 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 304 IPR045874 GO:0004672
Pvu1g0500 310 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 10 304 - -
Pvu1g0500 310 Gene3D Transferase(Phosphotransferase) domain 1 89 288 - -
Pvu1g0500 310 ProSiteProfiles Protein kinase domain profile. 10 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0500 310 SMART serkin_6 10 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0500 310 ProSitePatterns Protein kinases ATP-binding region signature. 16 38 IPR017441 GO:0005524
Pvu1g0500 310 PIRSF ILK 4 288 - -
Pvu1g0500 310 Gene3D Phosphorylase Kinase; domain 1 9 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0500 Pvu-Chr1 5412446 5414243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0500 12 301 Receptor kinase-like Gene Family AT5G38280 51.014 9.14e-106 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0500 Pkinase 5.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0500 - - pvu:PHAVU_001G048000g 566.229