Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu1g0499 | ATGATGTGGAAAGAGAGAGCATTCATGGTGGTACTGCTACTTCTAGTCCACAAAATTCATGGTGGCTGCCCCTCCTCTTCCTGTGGTCAAATCACCAACATCAATTACCCTTTTCGATTCAAAGGCGACCCAGAAGAGTGTGGTGAGGAAGGTTATGAGCTTGGCTGTGAGAATAATGTTACGGTGTTGTATCTGTACTCTGCACAATATCATGTGCAGTCAATAAACTACAAGAACTACACAGTGAGAGTGGTTGATCCTGCTCTTCAACACCATAATCTCTCCTCCCTTCCTCTCCGTTTCCTCTCTCGTTCCAATTTCTCTGACACTTACACTTACACTTCCTTTTACGACTCGGATCCATACCAAGCCGGTCTAAGATCCTATGAAAATTGGGAATTGAGTTTCTCGCATATAGTGTTTGTGAATTGTAACCATTCGGTGGGAGAGAAAGGGAAGTATGTGGAGAGTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATGCATATGCAATTGGTGGAGACCTAAAAGCAGAGGACTTAGAAGTTGGGTGTGAGGTAAAGCTTGTTGCTCCCACTTCTCTCTCCACTTTCGATTACCATTCCTACTCTTCCATTCACACCGCACTCGCCTATGGATTCCAGATTTCATGGATAAAACTCACCTGTCAGAATCTTTGTCCAGATGATGATAGCTATTGCTATTTCGACTCTTCTAACCAGAAGCTTCAATGCCGCCGATCTGGTCTAACACCGCTGGGAGTGCTAATCCTGTATCTAGCAGGTATTCTCATAGGAAGGGCTTACAAAGTTGTGTTTGGATTGCCATTCATAATTGTTATTTTTACATATAAATGGAGAAAAAGACATATGTCAATGTATGGAAATATTGAAAATTACCTTGAACAAAATAGTTTGACACCAATTAGATACTCATACAAGGAAATCAAGAAGATGGCTGTAGGTTTCAAAGAGAAGTTAGGTGAAGGAGGATTTGGCTCTGTCTTTAAGGCAAAGTTGTGCAGTGGGCCTTTTGTGGCCATCAAAATGTTAGGCAAATCGAAAGCAAATGGACAAGATTTTATCAATGAAGTTGCGACCATTGGAAGAATACATCATCAAAATGTGGTACAGTTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCTCTTGTTTATGAATTTATGTCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGAGAGAAATATACATTTAAGCTATGAAAAGATATATAATATGTCAATTGGAGTGGCTCGTGGGATTACTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGACATCAAACCTCATAACATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGTATCGTCACAATGATTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAACTATTTTACAAAAATATTGGAGGAATATCCCATAAAGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAAATGGCGAGCAAGAGGAAGAATCTAAATCCCCATGTAGACCACTCAAGTCAACTTTACTTTCCACTCTGGATCTATGATCATATCGAAGAAGAGGAAGATATAGATATGGAAGATTTGACTGAAGAGAAAAAGATAATAGCAAAGAAAATGATTATAGTGTCTCTTTGGTGCATACAATTAAAACCAATTGATCGACCCTCAATGAATAGAGTAGTGGAAATGCTTGAAGGGGACATTGAAGACTTGGAAATACCTCCAAAGCCTACTTTATTTCCAAATGAAATGAGTAGAGATGGTGAAACAATAAACTCGACATCGAATGAATTGAACTCGTTCTCTTATACATGCAATTGA | 1902 | 0.3922 | MMWKERAFMVVLLLLVHKIHGGCPSSSCGQITNINYPFRFKGDPEECGEEGYELGCENNVTVLYLYSAQYHVQSINYKNYTVRVVDPALQHHNLSSLPLRFLSRSNFSDTYTYTSFYDSDPYQAGLRSYENWELSFSHIVFVNCNHSVGEKGKYVESGEWVKWEGKGYAYAIGGDLKAEDLEVGCEVKLVAPTSLSTFDYHSYSSIHTALAYGFQISWIKLTCQNLCPDDDSYCYFDSSNQKLQCRRSGLTPLGVLILYLAGILIGRAYKVVFGLPFIIVIFTYKWRKRHMSMYGNIENYLEQNSLTPIRYSYKEIKKMAVGFKEKLGEGGFGSVFKAKLCSGPFVAIKMLGKSKANGQDFINEVATIGRIHHQNVVQLIGFCVSGSKRALVYEFMSNGSLDKFIFSKERNIHLSYEKIYNMSIGVARGITYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTMIAARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMASKRKNLNPHVDHSSQLYFPLWIYDHIEEEEDIDMEDLTEEKKIIAKKMIIVSLWCIQLKPIDRPSMNRVVEMLEGDIEDLEIPPKPTLFPNEMSRDGETINSTSNELNSFSYTCN* | 634 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu1g0499 | 633 | Gene3D | Transferase(Phosphotransferase) domain 1 | 396 | 599 | - | - | |
Pvu1g0499 | 633 | PANTHER | STRESS-INDUCED RECEPTOR-LIKE KINASE | 265 | 617 | - | - | |
Pvu1g0499 | 633 | PANTHER | STRESS-INDUCED RECEPTOR-LIKE KINASE | 17 | 245 | - | - | |
Pvu1g0499 | 633 | SMART | serkin_6 | 321 | 591 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0499 | 633 | MobiDBLite | consensus disorder prediction | 612 | 633 | - | - | |
Pvu1g0499 | 633 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 265 | 617 | IPR045874 | GO:0004672 | |
Pvu1g0499 | 633 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 17 | 245 | IPR045874 | GO:0004672 | |
Pvu1g0499 | 633 | ProSitePatterns | Protein kinases ATP-binding region signature. | 327 | 349 | IPR017441 | GO:0005524 | |
Pvu1g0499 | 633 | MobiDBLite | consensus disorder prediction | 611 | 633 | - | - | |
Pvu1g0499 | 633 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 441 | 453 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu1g0499 | 633 | ProSiteProfiles | Protein kinase domain profile. | 321 | 606 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0499 | 633 | Pfam | Protein kinase domain | 324 | 589 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0499 | 633 | Gene3D | Phosphorylase Kinase; domain 1 | 296 | 395 | - | - | |
Pvu1g0499 | 633 | SUPERFAMILY | Protein kinase-like (PK-like) | 310 | 592 | IPR011009 | - | |
Pvu1g0499 | 633 | Pfam | Wall-associated receptor kinase galacturonan-binding | 23 | 86 | IPR025287 | GO:0030247 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu1g0499 | Pvu-Chr1 | 5376702 | 5383434 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu1g0499 | 24 | 606 | Receptor kinase-like Gene Family | AT5G38260 | 36.529 | 3.38e-121 | 372 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Pvu1g0499 | Pkinase | 3.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu1g0499 | - | - | vun:114195573 | 876.315 |