Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0495 ATAAATATACATTTAAGCTATGAAAAGATATATAATATATCAATCGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAAATTTTGCATTTTGACATCAAACCCCATAATATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCGATAGATAATAGTATTGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAATTGTTTTATAATAATATTGGAGGAATATCTCATAAGGTTGATGTTTATAGCTTCGGAATGTTGTTGATGGAGATGGCAAGTAAGAGGAAGAATCTAAATCCTTATGCAGACCACTCAAGTCAACTTTACTTTCCCCTTTGGATCTATGATCATATTAGGGAAGAGGAAGATGTAGATATCGAAGATGTGACAGAAGAGGAAAATAAAATAGCAAAGAAGATGATCATAGTTGCATTATGGTGTATACAACTAAAACCAAATGATCGACCCTCAATGAATAGAGTAGTGGAAATGCTTGAAGGGGATATTGAAGACTTGGAAATCCCTCCAAAACCTATTCTATTTCCAGATGAAACAGTGACAAAGGAACAAATAATCAACTCTAGCTAG 639 0.3552 INIHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYNNIGGISHKVDVYSFGMLLMEMASKRKNLNPYADHSSQLYFPLWIYDHIREEEDVDIEDVTEEENKIAKKMIIVALWCIQLKPNDRPSMNRVVEMLEGDIEDLEIPPKPILFPDETVTKEQIINSS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0495 212 SUPERFAMILY Protein kinase-like (PK-like) 5 183 IPR011009 -
Pvu1g0495 212 SMART serkin_6 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0495 212 Pfam Protein kinase domain 5 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0495 212 Gene3D Transferase(Phosphotransferase) domain 1 2 190 - -
Pvu1g0495 212 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 3 206 - -
Pvu1g0495 212 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0495 212 ProSitePatterns Serine/Threonine protein kinases active-site signature. 32 44 IPR008271 GO:0004672|GO:0006468
Pvu1g0495 212 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 206 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0495 Pvu-Chr1 5298347 5298987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0495 1 203 Receptor kinase-like Gene Family AT5G38280 49.038 5.15e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0495 Pkinase 2.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0495 - - pvu:PHAVU_001G048000g 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0495 1 5298347 5298987 Pvu1g0495 1 5298347 5298987 ECH