Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0494 TTTGTGAATTGTAAGGATTGGGTGAGAGAGAAAGGGAAGTATGTGGAGAGTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATGCATATGCAATTGGTGGAGACCTAAAAGCAGAGGACTTAGAAGTTGGGTGTGAGGTAAAGCTTGTTGCTCCCACTTCTCTCTCCACTTTCGATAACCATTCCTACTCTTCCATGCACACCGCACTCGCCTATGGATTCCAGATTTCATGGATAAAACTCGCCTGTCAGAATCTTTGTCAACTAAGAGTGGTTGTAACAAGTATTCTTGTATATATCTGGGCTTTAGTATGGGCTTACAAAGTTTTGTTTGGATTGCCATTCTTAATTGTTATTTTTATATGTAAATGGAGAAAAAGACATATGTCAATGTATGAAAATATTGAAAATTACCTTGAACAAAATAGTTGGGCACCTATTAGATACTCATACAAGGAAATCAAGAAGATGACGGCTGGTTTCAAATATAAGTTAGGTGAAGGAGGATTTGGCTCTGTCTTTAAGGCAAAGTTGCGTAGTGGACCTTATGTCGCCATCAAAATGTTAGACAAATCCAAAGGAAATGGACAAGATTTTATCAGTGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTGGTACAGTTAATTGGATTTTGTGTTAGTGGCTCAAATCGTGCTCTTGTCTATGAATTCATGTCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGATGGAAGTGTACATTTAAGCTATGAAAAGATATATAATATATCAATCGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAAATTTTGCATTTTGACATCAAACCTCATAACATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCAATAGAAAATAGCATCGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAATTGTTTTATAAAAATATTGGAGGAATATCCCATAAGGCTGATGTTTATAGTTTTGGAATGTTGTTGATGGAGATGGCAAGTAAGAGGAAGAATCTAAATCCCCATGCAGACCACTCAAGTCAACTTTACTTTCCCCTTTGGATCTATGATCATATTAGGGAAGGGGAAGATGTAGATGTCGAAGATGTGACAGAAGAGGGAAATAAAATAGCAAAGATGATCATAGTTGCATTATGGTGTATACAACTAAAACCAAATGATCGACCCTCAATGAATAGAGTAGTGGAAATGCTTGAAGGGGATATTGAAGACTTAGAAATACCTCCAAAACCTATTTTATTTCCAGAAGATGAAACAGTGAGAGAGTATCAAACAACCAACTCTAGCTAG 1380 0.3761 FVNCKDWVREKGKYVESGEWVKWEGKGYAYAIGGDLKAEDLEVGCEVKLVAPTSLSTFDNHSYSSMHTALAYGFQISWIKLACQNLCQLRVVVTSILVYIWALVWAYKVLFGLPFLIVIFICKWRKRHMSMYENIENYLEQNSWAPIRYSYKEIKKMTAGFKYKLGEGGFGSVFKAKLRSGPYVAIKMLDKSKGNGQDFISEVATIGRIHHQNVVQLIGFCVSGSNRALVYEFMSNGSLDKFIFSKDGSVHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIENSIVTMTAARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMASKRKNLNPHADHSSQLYFPLWIYDHIREGEDVDVEDVTEEGNKIAKMIIVALWCIQLKPNDRPSMNRVVEMLEGDIEDLEIPPKPILFPEDETVREYQTTNSS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0494 459 Gene3D Transferase(Phosphotransferase) domain 1 234 436 - -
Pvu1g0494 459 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 88 - -
Pvu1g0494 459 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 102 452 - -
Pvu1g0494 459 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Pvu1g0494 459 SUPERFAMILY Protein kinase-like (PK-like) 143 429 IPR011009 -
Pvu1g0494 459 ProSiteProfiles Protein kinase domain profile. 159 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0494 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Pvu1g0494 459 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 88 IPR045874 GO:0004672
Pvu1g0494 459 PANTHER RUST RESISTANCE KINASE LR10-RELATED 102 452 IPR045874 GO:0004672
Pvu1g0494 459 SMART serkin_6 159 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0494 459 Gene3D Phosphorylase Kinase; domain 1 132 233 - -
Pvu1g0494 459 Pfam Protein tyrosine and serine/threonine kinase 162 428 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0494 Pvu-Chr1 5285060 5287671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0494 148 452 Receptor kinase-like Gene Family AT5G38280 50.482 5.94e-109 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0494 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0494 - - vun:114195573 701.819