Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0493 ATGGTTGCAGGTTTCAAAGTGAAGTTAGGTGAAGGAGGATTTGGCTCAGTCTTTAAGGCAAAGTTGCGCAGCGGACCTTTTGTGGCCATCAAAATATTGGCCAAATCTAAAGGAAATGTGCAAGATTTTATCAGTGAAGTTGCAACCATTGGAATGATACATCATCAAAATGTGGTAAAGTTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCTCTTGTCTATGAATTCATGCCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGAGAGAAATATACATTTAAGCTATGAAAAGATATATAATATATCAATAGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAAATTTTGCATTTTGACATCAAACCTCATAACATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGCATCGTTACAATGACTGCAGCAAGAGCAATCATTGGATATATGGCTCCAGAATTGTTTTATAATAATATTGGAGGAATATCCTATAAGGCTGATGTTTATAGCTTTGGAATGTTATTGATGGAGATGGCAAGTAAGAGGAAGAATCTAAATACTCATGCAGATCACTCAAGTCAACTTTACTTTCCCCTTTGGATACATGATCATATTCAGGAAGAGGATGATGTAGATATCGGAGATGTGACAGAGGAGGAAAATAAAATAGCAAAGAAAATGATCATAGTTGCACTATGGTGTATACAACTAAAACCAAATGATCGACCCTCAATGAAGAGAGTAGTGGAAATGCTTGAAGGAGATATTGAAGACTTGGAAATACCTCCAAAACCTATTCTATTTCCAAATGAAACAGTGACATATATTCAATGTTGA 900 0.3578 MVAGFKVKLGEGGFGSVFKAKLRSGPFVAIKILAKSKGNVQDFISEVATIGMIHHQNVVKLIGFCVSGSKRALVYEFMPNGSLDKFIFSKERNIHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTMTAARAIIGYMAPELFYNNIGGISYKADVYSFGMLLMEMASKRKNLNTHADHSSQLYFPLWIHDHIQEEDDVDIGDVTEEENKIAKKMIIVALWCIQLKPNDRPSMKRVVEMLEGDIEDLEIPPKPILFPNETVTYIQC* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0493 299 SUPERFAMILY Protein kinase-like (PK-like) 8 274 IPR011009 -
Pvu1g0493 299 SMART serkin_6 3 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0493 299 Gene3D Transferase(Phosphotransferase) domain 1 82 281 - -
Pvu1g0493 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Pvu1g0493 299 ProSiteProfiles Protein kinase domain profile. 3 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0493 299 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 296 IPR045874 GO:0004672
Pvu1g0493 299 Pfam Protein kinase domain 7 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0493 299 PIRSF ILK 4 281 - -
Pvu1g0493 299 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 296 - -
Pvu1g0493 299 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Pvu1g0493 299 Gene3D Phosphorylase Kinase; domain 1 4 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0493 Pvu-Chr1 5271176 5272075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0493 1 294 Receptor kinase-like Gene Family AT5G38280 49.667 1.69e-102 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0493 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0493 - - pvu:PHAVU_001G048000g 551.977