Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0491 ATGGTGCTACTGCTACTTCTTGTCCGGAAAATTCATGGTGGCTGCCCCTCTTCTTCCTGTGCTAAAATCACCAACATCAATTACCCTTTTCGATTAAAAGGCGACCCAGAAGAGTGTGGTGAGAAAAGGTATGAGCTTGGTTGTGAGAATAACGTCACGGTGTTGTATCTGTACTCTGGAAAATATAATGTGCAGTCAATAAACTACAAGAACTACACAGTGAGAGTGGTTGATCCTGCTCTTCAACACCATAACCTCTCCTCCCTTCCTCTCCGCTTCCTCTCTCGCTCCAATTTCTCTGACACTTACACTTTATACTCGGATCAATACCAAGCCGGTCTAGGTGCCATTTTTAATTGGAAATCTGTGAGTTTCTCGCATATAGTGTTTGTGAATTGTAAGGATTGGGTGAAAGAGAAAGGGAAGTATGTGGAGAGTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATGCATATGCAATTGGTGGAGACCTAAAAGCTGAGGACTTAGAAATTGGGTGTGAGGTAAAGCTTGTTGCTCCCACTTCTCTCTCCACTTTCGATAACCATTCCTACTCTTCCATGCACACAGCACTCGCCTATGGATTCGAGATTTCATGGATAAAACTAGCATGTCATAAACATTGTCTATTTTTCCCTAGTTATGGCTATTTCGACTCTTATAACCAGAAGCTTAAATGCCCGTATGCTGTTGTTTTGTTTGGGTTGCCATTCTTAATTGTTATTTTTATACGTAAATGGAGAAAAAGACATATGTCAATGTATGAAAATATTGAAAATTACCTTCAGCAAAATAGTTTGGCACATATTAGATACTCATACAAGGAAATTAAGAAGATGGCTGCAGGTTTCAAAGATAAGTTAGGCGAAGGAGGATTTGGCTATGTCTTTAAGGCAAAGTTGCGTAGTGGGCCTTATGTCGCCATCAAAATGTTAGGGAAATGCAAAGGAAATGGACAAAATTTTATCAGTGAAGTTGCAACCATTGGAAGGATACATCATCAAAATGTGGTAAAGTTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCTCTTGTCTATGAATTCATGCCCAATGGATCTCTTGATAAATTTATTCTCTCAAAAGAGAGAAATATACATTTAAGCTATGAAAAGATATATAATATATCAATAGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAAATTTTGCATTTTGACATCAAACCCCATAACATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCAATAAATAATAGCATCGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAAAATTGTTTTATAATAATATTGGAGGAATATCCTATAAGGCTAATGTTTATAGCTTTGGAATGTTATTGATGGAGATGGCAAGTAAGAGGAAGAATCTAAATACTCATGCAGATCACTCAAGTCAACTTTACTTTCCCCTTTGGATACATGATTATATTCGGGAAGAGGAAGACGTAGATATCGGAGATGTGACAGAGGAGGAAAATAAAATAGCAAAGAAAATGATCATAGTTGCACTATGGTGTATACAACTAAAACCAAATGATCGACCCTCAATGAATAGAGTAGTGAAAATGCTTGAAGGGGATATTGAAGACTTGGAAATACCTCCAAAGCCTATTTTATTTCTAGAAGATGAAATAGTGACTGACTATCAAACAACCAACTCTAGCTAA 1773 0.3835 MVLLLLLVRKIHGGCPSSSCAKITNINYPFRLKGDPEECGEKRYELGCENNVTVLYLYSGKYNVQSINYKNYTVRVVDPALQHHNLSSLPLRFLSRSNFSDTYTLYSDQYQAGLGAIFNWKSVSFSHIVFVNCKDWVKEKGKYVESGEWVKWEGKGYAYAIGGDLKAEDLEIGCEVKLVAPTSLSTFDNHSYSSMHTALAYGFEISWIKLACHKHCLFFPSYGYFDSYNQKLKCPYAVVLFGLPFLIVIFIRKWRKRHMSMYENIENYLQQNSLAHIRYSYKEIKKMAAGFKDKLGEGGFGYVFKAKLRSGPYVAIKMLGKCKGNGQNFISEVATIGRIHHQNVVKLIGFCVSGSKRALVYEFMPNGSLDKFILSKERNIHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPINNSIVTMTAARGTIGYMAPKLFYNNIGGISYKANVYSFGMLLMEMASKRKNLNTHADHSSQLYFPLWIHDYIREEEDVDIGDVTEEENKIAKKMIIVALWCIQLKPNDRPSMNRVVKMLEGDIEDLEIPPKPILFLEDEIVTDYQTTNSS* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0491 590 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Pvu1g0491 590 Pfam Protein kinase domain 292 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0491 590 PANTHER RUST RESISTANCE KINASE LR10-RELATED 238 581 IPR045874 GO:0004672
Pvu1g0491 590 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 216 IPR045874 GO:0004672
Pvu1g0491 590 Gene3D Phosphorylase Kinase; domain 1 251 363 - -
Pvu1g0491 590 Gene3D Transferase(Phosphotransferase) domain 1 364 567 - -
Pvu1g0491 590 SUPERFAMILY Protein kinase-like (PK-like) 275 560 IPR011009 -
Pvu1g0491 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Pvu1g0491 590 SMART serkin_6 289 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0491 590 ProSiteProfiles Protein kinase domain profile. 289 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0491 590 Pfam Wall-associated receptor kinase galacturonan-binding 15 78 IPR025287 GO:0030247
Pvu1g0491 590 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 238 581 - -
Pvu1g0491 590 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 10 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0491 Pvu-Chr1 5257704 5260367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0491 16 572 Receptor kinase-like Gene Family AT5G38260 36.288 1.98e-110 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0491 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0491 - - pvu:PHAVU_001G048700g 921.768