LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu1g0477	ATGGCCAGACCACAACAGCGTTACCGAGGTGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCCATATTGAAGACCAGGATATGGCTTGGTACATTTGAAACAGCTGAAGATGCAGCTAGAGCCTATGATGAAGCAGCTAGGCTAATGTGTGGTGCCAGGGCAAGGACAAACTTCCCTTTCAACCCCAATGTCTCTCACACATCATCTTCTAGTTCAAAGCTTCTCTCAGCAACTTTGACTGCCAAACTGCACAGGTGCTACATGGCTTCTTTGCAAATGACAAGACAGGCTTTGGCATCATCTGAGTCTCAGAGAACACCTTCAGTGCCCAATGCCACTTCCACATCCCCACCAAGCAGCTTCAGTGTGAAGAGTGACCAAACTCATCAAGTGTTGCCACACAAGAGAGCAGAGGAGGGTCAAGACTCAGAGGCCAACAGGGGTGTTAAAATGGTCAGAGCTCTTGAAAGTGTTCCCCTGCAGTTCAAGCCTCTTGAGGAAGATCACATAGAGCAGATGATTGAGGAGCTTCTTGATTATGGCTCTGTTGAGCTTTGCTCTGTCTTTTCACCCCAGACCCTTTAA	600	0.4883	MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGARARTNFPFNPNVSHTSSSSSKLLSATLTAKLHRCYMASLQMTRQALASSESQRTPSVPNATSTSPPSSFSVKSDQTHQVLPHKRAEEGQDSEANRGVKMVRALESVPLQFKPLEEDHIEQMIEELLDYGSVELCSVFSPQTL*	200

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu1g0477	199	Pfam	AP2 domain	7	56	IPR001471	GO:0003700\|GO:0006355
Pvu1g0477	199	MobiDBLite	consensus disorder prediction	103	133	-	-
Pvu1g0477	199	Gene3D	AP2/ERF domain	6	65	IPR036955	GO:0003700\|GO:0006355
Pvu1g0477	199	MobiDBLite	consensus disorder prediction	134	151	-	-
Pvu1g0477	199	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE	1	193	-	-
Pvu1g0477	199	SMART	rav1_2	7	70	IPR001471	GO:0003700\|GO:0006355
Pvu1g0477	199	ProSiteProfiles	AP2/ERF domain profile.	7	64	IPR001471	GO:0003700\|GO:0006355
Pvu1g0477	199	MobiDBLite	consensus disorder prediction	103	152	-	-
Pvu1g0477	199	PANTHER	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	1	193	-	-
Pvu1g0477	199	SUPERFAMILY	DNA-binding domain	7	65	IPR016177	GO:0003677

Showing 1 to 10 of 13 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu1g0477	Pvu-Chr1	5091472	5092865	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu1g0477	1	199	AP2-EREBP Transcription Factor Family	AT5G25190	62.687	1.20e-76	226

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Pvu1g0477		AP2	6.5e-12	CL0081

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu1g0477	-		-	gmx:100785918	312.383

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g0477	1	5091472	5092865	Pvu9g0917	9	13898357	13899669	PCT

Showing 1 to 1 of 1 entries