Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0470 ATGGCTGCAACTCAGGCTAATGATCCTAGAAGCATAGTTTCTGTTTCAAGGATTGTGTCTGTGAATCCCAAACTTGTGCAACCTCAGAGGGTTTTGACTCTTTCAAATTTGGACAGGCAGTGTCCACACCTCATGCACTTGGTGTTCTTCTACAATAACCTGCCTCACCAGAGGTTGAAGGACTTGTCCCTCAATTCAGTGTTCTCCAACTTGAAATCTGGCTTGGAAGATACCTTGGCTCTATGGTATCCTGGTGCAGGTAGGCTTTGGCCGAATCAAAGTGATGGCAGGCTCAACCTGTGGTGCAACAACCATGGTGCAGTTCTGGCAGAGGCTGAAACTTCTGCTAAAATTTCACAACTTGGAGACCTCTCTGAGTACAGTGAATTCTTTGAGAAGCTGGTTTATAAGCCAGCTTTTGATGGGAACTTCTCAAACATGCCGCTGATTGTTGCTCAGGTCACTAAATTTGGTTGTGGAGGGTATTCAATTGGTATTGGAACAAGCCACTCGTTGTTTGATGGGCCAGCAACCTATGACTTCTTGTATGCATGGGCTTCAAATTCAGAAATTGTGAAAGGAAGAAGCAGATCTGATGAGGTTCCAAAGCCAGTGCATGAAAGAGGGATACTTCTGAGTGGTACTCTTGAAGCCCCAAGAGAGACTACAAAACTCCTATCAGATTCAAGTTCAAATGCTAAGGAAGGAAGGGCCATGGCAATAGATCACTTATATCATCTTATAATGCAAACAGCTAGTTCACAAAAGGGTTTTCCTCTGCAAATTGGAACACCCTCTAGTTCAAAGAAGTGTGTTCTTAAAACCTATCATCTTTCAGGTGTAATGACAGAAAACTTGAAAAGGAAACACTTGCCCATGCAAAGAGGTTCATTTCCTTTCTCAACCTTTGAGGTTCTTGCGGCTCACCTTTGGAAGGCAAGGAGCAAAGCCTTAGGGGTGAAAAGGGAAAAACAAGTATGCCTCCAATTCGCAGTGGACATAAGGAACAAGATGAGACCCCCATTGCCAAAATGCTTCAGTGGAAATGCATATGTTCTTGCCTCCATCATGATGCCAATGGGAGAATTGGAAGACGCAAGCCATGAACGCATCATTGAGAAAATAAGAGAGGCGAAGAAGAAGGTGAATCATGAGTATGTGAGAAGCTATGTTGAGGCACTAGAAGGAGCACAGCAAGGTTCTTCTCTCCCTCCACTTCAGGAGCTAACTCTGGTTTCTGATTGGACAAGAATGCCCTTTCACAACATCGAGTTTTTCCATGGAAAAGCAACCTATGCATGCCCTCTTGCCACTCCCATCCCACAGGTCGCATACTTCATGCAGAGCCCTACTGACAGCATGGGCGTTGACGTCAGAATTGGCTTGGAAGCTGAAAATATAAGTGCTTTTAGTCACTGCTTTTTAAGCATGGCGTGA 1437 0.4454 MAATQANDPRSIVSVSRIVSVNPKLVQPQRVLTLSNLDRQCPHLMHLVFFYNNLPHQRLKDLSLNSVFSNLKSGLEDTLALWYPGAGRLWPNQSDGRLNLWCNNHGAVLAEAETSAKISQLGDLSEYSEFFEKLVYKPAFDGNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLYAWASNSEIVKGRSRSDEVPKPVHERGILLSGTLEAPRETTKLLSDSSSNAKEGRAMAIDHLYHLIMQTASSQKGFPLQIGTPSSSKKCVLKTYHLSGVMTENLKRKHLPMQRGSFPFSTFEVLAAHLWKARSKALGVKREKQVCLQFAVDIRNKMRPPLPKCFSGNAYVLASIMMPMGELEDASHERIIEKIREAKKKVNHEYVRSYVEALEGAQQGSSLPPLQELTLVSDWTRMPFHNIEFFHGKATYACPLATPIPQVAYFMQSPTDSMGVDVRIGLEAENISAFSHCFLSMA* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0470 478 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 477 - -
Pvu1g0470 478 PANTHER BRASSINOSTEROID-RELATED ACYLTRANSFERASE 1 11 477 - -
Pvu1g0470 478 Gene3D - 10 223 IPR023213 -
Pvu1g0470 478 Gene3D - 251 476 IPR023213 -
Pvu1g0470 478 Pfam Transferase family 20 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0470 Pvu-Chr1 4947770 4954371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0470 13 470 Monolignol Biosynthesis Gene Families AT5G48930 25.000 2.05e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0470 K15400 - gmx:100803347 792.727