Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0461 ATGGAGATGTCATTTGTGGTTGCAGTGCCATTAAGAGTAGGTAATTGTTGTTCAGTCTGTGATAACCCAACCATAGTTTCCCCCATGGATGTATCTAGGTTTAAGCTGATGGCGGATACAGGGTTGTTATCTAATTCTGTAACTAAGGTTTCCACCAAGACAGTTGCAGGTTCCGATGATTGTGATGAGAGTGGCAATTTGGAGGATGAAGCTGGTATTACTGAGGTTATACCACCAAAACAGGATAGAGAAGGAGAGAATCCTATGTTAGATATGATATCCCAAAATGGAAGCACTTTGGTTGCTGGTGATGAAGTGTTAGCCGATGAAATTGAGGAGGATTCATTGTCATTGGAAGGTGACCAGGTTGTTGATAGCTCATGTTCTCTTTCTGCAGTCAGTGAGAACAGTAGTGTGTGTGGAGAGGAGTCCTTCTGTTTTGATGCTATTTCTGATGTCGGGACACCGTGTTCTGCTTATGTAGATAAGAGCATTGGTGCTGTCAATATTGTTGCCGAGGCAGTTGATTTGGGGGAATCAAACGTTGACACAGATATTACGACTGAACCTCTTGCTGTGGCAGTGAGCCTTGAAGAAGAGAATGGAATTAGAACTGACCCTAATCCTTCTGACGTTGTTCTTCATCAGTTGCCCCAGGAAAAGGGGGTGAGTGGAATGGTTGGTCGGAGTGTTTTTGAATTGGATTATACCCCACTTTATGGATTCATATCTGTGTGCGGAAGAAGACCTGAGATGGAAGATTCACTTGCAACTGTGCCTCGATTTTTGAAAATTCCTATTCAGATGCTAATTGGTGATCGGGTGCTTGATGGAATAAACAAGTGTTTTAATCAGCAGATGACTCATTTCTTTGGAGTCTATGATGGCCATGGTGGTTCTCAGGTCGCAAAGTATTGTCAAGATCGCATCCACAAGGCTTTGGCTGAGGAAATAGAATTTTTCAAGGAAACTCTAATCAGTGGAAGTATGAAGGATGGTTGTCAAGATCAGTGGAAAAAAGCTTTCACCAATTGTTTCCTAAAGGTTGATGCTGAAGTTGGAGGGAAAGTTGATAATGAACCTGTTGCCCCAGAAACTGTCGGCTCCACTGCTGTTGTTGCTGTTATTTCTTCATCTCATATCATAGTTGCAAATTGTGGTGATTCAAGAGCAGTTCTATGTCGCGGCAAAGAACCCATTGCATTATCAGAGGACCATAAACCTAACCGAACGGATGAACATGCAAGAATTGAGGCAGCTGGAGGAAAAGTGATTCAATGGAATGGTCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCTATCGGGGATAGATATTTGAAGCCATGGATTATTCCCGAACCAGAAGTTAGGTTTCTTCCCAGGACAAAAGACGATGAGTGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTTATGTCAAACGAAGAGGTCTGTGACCTTGCCCGGCGACGGATAGTTCTCTGGTACAAGAAAAATGGCTTGGAACAACCCTCATCAGAAAGGGGAGAGGGAGTTGATCCTGCTGCACAAGCAGCAGCAGAATACCTATCAAACCGTGCCCTTCAGAAAGGAAGCAAAGATAATATCACTGTGATTGTGGTTGATTTGAAACCCCAGAGGAAATATAAGAGCAAGTCATGA 1665 0.433 MEMSFVVAVPLRVGNCCSVCDNPTIVSPMDVSRFKLMADTGLLSNSVTKVSTKTVAGSDDCDESGNLEDEAGITEVIPPKQDREGENPMLDMISQNGSTLVAGDEVLADEIEEDSLSLEGDQVVDSSCSLSAVSENSSVCGEESFCFDAISDVGTPCSAYVDKSIGAVNIVAEAVDLGESNVDTDITTEPLAVAVSLEEENGIRTDPNPSDVVLHQLPQEKGVSGMVGRSVFELDYTPLYGFISVCGRRPEMEDSLATVPRFLKIPIQMLIGDRVLDGINKCFNQQMTHFFGVYDGHGGSQVAKYCQDRIHKALAEEIEFFKETLISGSMKDGCQDQWKKAFTNCFLKVDAEVGGKVDNEPVAPETVGSTAVVAVISSSHIIVANCGDSRAVLCRGKEPIALSEDHKPNRTDEHARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVRFLPRTKDDECLILASDGLWDVMSNEEVCDLARRRIVLWYKKNGLEQPSSERGEGVDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKPQRKYKSKS* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0461 554 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 103 553 - -
Pvu1g0461 554 CDD PP2Cc 240 544 IPR001932 -
Pvu1g0461 554 Pfam Protein phosphatase 2C 277 537 IPR001932 -
Pvu1g0461 554 Gene3D - 226 554 IPR036457 -
Pvu1g0461 554 PANTHER ALPHABET, ISOFORM E-RELATED 103 553 - -
Pvu1g0461 554 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
Pvu1g0461 554 SUPERFAMILY PP2C-like 232 546 IPR036457 -
Pvu1g0461 554 ProSiteProfiles PPM-type phosphatase domain profile. 239 544 IPR001932 -
Pvu1g0461 554 SMART PP2C_4 227 542 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0461 Pvu-Chr1 4798017 4802900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0461 136 554 PP2C-type Phosphatase Gene Family AT1G17550 54.186 8.24e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0461 K14497 - gmx:100805281 960.674