Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu1g0460 | ATGTCGTCGGTTTACGTTCTAGAACCTCCGACGAAGGGGAAAGTGGTACTGAGCACCACGCGCGGGCCTTTGGACATCGAGCTATGGCCGAAGGAGGCTCCGAAAGCCGTGAGGAACTTCGTGCAGCTCTGCCTCGAAAACTATTATGACGACACCATCTTCCACCGCGTCATCAAGGACTTCCTCGTCCAAACCGGCGATCCCACCGCCTCCGGCACCGGAGGTGAAAGCATTTATGGTGGTGTTTTTGCTGATGAGTTTCATTCTCGTTTGAAATTCAAGCACAGAGGAATAGTTGCGATGGCAAGTTCTGGATCTCCAAATTCCAATGGAAGTCAGTTTTTCATCACTCTCGACCGTTGTGACTGGCTTGATCGCAAGCATACAATTTTTGGAAAAGTGACAGGAGATACAATGTATAATCTTTTGAGACTGGGTGAAGTTGAAACTGATAAGAATGACCGGCCTTTAGATCCGCCAAAGATTTTATCAGTTGAGGTGTTATGGAATCCATTTGAAGATATTGTTCCAAGAACACTCCAGAAATCACAAACTGAAGCTAGAGTTGATGCTGAAAGTAAAGAGCAGAAGAAGAAAGGTGTAAAAAAATTGAACTTGCTTTCATTTGGGGAAGAAGCTGAAGAAGATGAAAAGGAATTGGCATCGGTGAAGCAAAAGATTAAGAGCAGTCACGATGTCTTGAACGATCCTCGTCTTCTAAAGGAAGAAACACCTGATGGCGAACTGAGTTCGTCAAGAAGAGATCTGCAGTTGTCTGTTAGGGAGACACTTAACTCTAAGAAAGAAGAGCCTCAGAAAGATTCAGCACCTGGTAACATTGCTCGTCTTGATTCCAGTGATGATGATGAAGCAGATTTTGATTCAAGAATGCGCATGCAGATACTCAAAAAGCGGAAGGAGTTGGGTGATCTCCCTCCAAAGTCCAAGTTGCAAAAAGGAGGAGGAAGGTCGATTCCAGAGAATCATGATACGTCAGCACCAAGGTCCAATGCTGTCAGTGCTGATGAGGATCAACCAAAGGTGGAAAAGTTGTCCATGAAGAAAAAGGGAGTAGGATCTGAAGCAAGAGCTGAACGAATGGCTAATGCAGATGCAGATCTGCAACTATTAAATGAAACTGAGAGAGGAAGACAATTGCAGAAGCAGAAGAAACGCCGACTTCAGGGGCGCGAAGATGAAGTTCTGGCTAAACTTCAAAAATTTAAGAGTTCTTTAGCAGCAAAGGAGACACCCCCTGCAGGCAAATCTGGAGATGTTAACAGTGAGTTGTCTGACTGGAAAGGTGTCAGTTTAAAATTTGACCCCGAGTCTGGCAAGGACCGCATGTCACGCAATGAGGACCCAAATGACTATGTTGTGCACGACCCACTTCTGGAAAAGGGGAAAGAGAAGTTTAATAGGATGATGGCCAAACAAAAGAGACGAGAACGAGAGTGGGCTGGGAGATCTCTTACTTGA | 1479 | 0.4517 | MSSVYVLEPPTKGKVVLSTTRGPLDIELWPKEAPKAVRNFVQLCLENYYDDTIFHRVIKDFLVQTGDPTASGTGGESIYGGVFADEFHSRLKFKHRGIVAMASSGSPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRLGEVETDKNDRPLDPPKILSVEVLWNPFEDIVPRTLQKSQTEARVDAESKEQKKKGVKKLNLLSFGEEAEEDEKELASVKQKIKSSHDVLNDPRLLKEETPDGELSSSRRDLQLSVRETLNSKKEEPQKDSAPGNIARLDSSDDDEADFDSRMRMQILKKRKELGDLPPKSKLQKGGGRSIPENHDTSAPRSNAVSADEDQPKVEKLSMKKKGVGSEARAERMANADADLQLLNETERGRQLQKQKKRRLQGREDEVLAKLQKFKSSLAAKETPPAGKSGDVNSELSDWKGVSLKFDPESGKDRMSRNEDPNDYVVHDPLLEKGKEKFNRMMAKQKRREREWAGRSLT* | 493 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu1g0460 | 492 | MobiDBLite | consensus disorder prediction | 439 | 463 | - | - | |
Pvu1g0460 | 492 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 49 | 66 | IPR020892 | GO:0003755|GO:0006457 | |
Pvu1g0460 | 492 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 28 | 43 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu1g0460 | 492 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 54 | 66 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu1g0460 | 492 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 98 | 113 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu1g0460 | 492 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 113 | 125 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu1g0460 | 492 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 126 | 141 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu1g0460 | 492 | CDD | cyclophilin_CeCYP16-like | 8 | 179 | - | - | |
Pvu1g0460 | 492 | Gene3D | - | 2 | 182 | IPR029000 | - | |
Pvu1g0460 | 492 | MobiDBLite | consensus disorder prediction | 260 | 275 | - | - | |
Pvu1g0460 | 492 | MobiDBLite | consensus disorder prediction | 342 | 368 | - | - | |
Pvu1g0460 | 492 | MobiDBLite | consensus disorder prediction | 225 | 250 | - | - | |
Pvu1g0460 | 492 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 15 | 167 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu1g0460 | 492 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 22 | 167 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu1g0460 | 492 | PANTHER | SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG | 5 | 202 | - | - | |
Pvu1g0460 | 492 | SUPERFAMILY | Cyclophilin-like | 14 | 184 | IPR029000 | - | |
Pvu1g0460 | 492 | MobiDBLite | consensus disorder prediction | 283 | 313 | - | - | |
Pvu1g0460 | 492 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 5 | 202 | IPR044666 | - | |
Pvu1g0460 | 492 | MobiDBLite | consensus disorder prediction | 225 | 463 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu1g0460 | Pvu-Chr1 | 4772363 | 4781592 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu1g0460 | 9 | 172 | U-box Gene Family | AT5G67530 | 46.341 | 3.17e-41 | 154 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu1g0460 | K12737 | - | gmx:100793148 | 822.002 |