Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0457 ATGGGTACTAAAAGGAACACATGGAAGTCTGTGATCTTGATCTTAAGTTGTTACAAGGTTAAGTGCTCCTTGGAGGAATCAGAGAAACAGGTTTTGAAACAAGGGTCTTTCCAGAGGCTGTGTCTATCTGATGTGAGCAATTCAAGCTCCACTCAGGCCATTGAGGATCTTTCAATTTCCTTTGGTGGCTCCAAACTTTATGCATTCACACTTGAGGAGCTAAGGGAAGCAACGAGCAGTTTCTCATGGAGTAATATGCTAGGAGAAGGAGGGTTTGGACCTGTGTACAAGGGTTTTGTGGATGACAAACTTAGGCCAGGTTTGAAAGCTCAGACTGTTGCTGTGAAAAGGTTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAACTAAGGCATCCACATCTTGTAAAGTTAATAGGGTACTGTTATGAAGATGAAAACAGGCTTTTGATGTATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAGATACTCTGCTGCTATGCCATGGTCAACCAGGATGAAAATTGCATTAGGAGCTGCCAAAGGTCTGGCCTTCCTTCATGAAGCAGATAAGCCTGATTTCACAGCTAAACTCTCAGACTTTGGTCTAGCCAAGGATGGCCCTGAAGGGGAAGATACATATGTAACAACACGCATAATGGGAACACAAGGATATGCTGCTCCTGAGTACATAATGACAGGTCATCTTACAACCAAGAGTGATGTGTATAGCTATGGAGTGGTGCTGTTGGAATTGCTTACGGGAAGACGAGTGGTGGATAAGTCTCGGTCGAATGGTGGCAAGAGCTTAGTGGAATGGGCAAGGCCTTTACTGAGAGATCCGAAAATAGTTTATAGCATCATAGATTGTAGACTAGAAGGGCAATTTCCCATGAAAGGAGCCATGAAAGTTGCTATGTTGGCTTTTAAATGCTTGAGTCCTCACCCAAATGCAAGGCCAACTATGAGTGATGTGGTGAAGGTGTTGGAGCCACTTCAGGACTTCGATGATGTTTTCATTGGACCATTTGTGTATGTTGCCGTAAGTGAAAATGGTAACAAACATAAAATATAG 1116 0.4355 MGTKRNTWKSVILILSCYKVKCSLEESEKQVLKQGSFQRLCLSDVSNSSSTQAIEDLSISFGGSKLYAFTLEELREATSSFSWSNMLGEGGFGPVYKGFVDDKLRPGLKAQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDENRLLMYEYMPRGSLENQLFRRYSAAMPWSTRMKIALGAAKGLAFLHEADKPDFTAKLSDFGLAKDGPEGEDTYVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVDKSRSNGGKSLVEWARPLLRDPKIVYSIIDCRLEGQFPMKGAMKVAMLAFKCLSPHPNARPTMSDVVKVLEPLQDFDDVFIGPFVYVAVSENGNKHKI* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0457 371 Pfam Protein tyrosine and serine/threonine kinase 83 343 IPR001245 GO:0004672|GO:0006468
Pvu1g0457 371 ProSiteProfiles Protein kinase domain profile. 81 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0457 371 PANTHER KINASE 1B 21 368 - -
Pvu1g0457 371 SUPERFAMILY Protein kinase-like (PK-like) 58 344 IPR011009 -
Pvu1g0457 371 Gene3D Transferase(Phosphotransferase) domain 1 164 353 - -
Pvu1g0457 371 Gene3D Phosphorylase Kinase; domain 1 42 163 - -
Pvu1g0457 371 PANTHER OS01G0588500 PROTEIN-RELATED 21 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0457 Pvu-Chr1 4748584 4751285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0457 69 343 Glycoside Hydrolase AT3G07070 48.464 4.97e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu1g0457 PK_Tyr_Ser-Thr 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0457 - - gmx:100802636 697.967