Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0447 ATGGAATCGGAGGATTTGGTGAAACAGGAATTGGAGGAATTGCAGAAACAATTGGGGAAGAAGCAGAAGTTTGAAGCTTCTGTTTCGTCCCTCAAATGCCTTCTCCAATGCTCATATCCTTCAGCTTCTCTATCGCTTCGCCAATCCTTTTATTCGGTTATATGCCGAGTTGCTACTGTGTTGAAGAGCAGATATACAGCACCAGGTTTCTGGAATGCTGGACTGGGACTTTTTGAACTGGCTTATTTGCTTGTTTCTGAACCTTCTGAGAAGGAACACTTGAAGGCTTGCATTGCTCAGGCCAGAGAACATTTACATCTGGAAGACAACCCATCACTACAAGCTTCACAATTTTCAGATAATCAAGCACACAGAGGATATCTTTTTGAGGGGCACCTTACGGTTGATCCTGAACCACCACAACCTCAATGGTTGGTGCAGTCAAACCTCTTGTCAACAGCTGCTACACTCTTTGCTGCCGAATCCTCTCAAGCTTCTGCAGCAAATGAAACCACCCAAGAGGATGCAGCAAATATGCTTCAAGATCTTATAAATAGATTGGAAGAAGTTGTGCCGTTGATGGTGGATGAAGGTACTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAGGTTGTGGCAAAACTTCCAGTCATTACTCTCACAGAGGAAATTTTGGCTACTTTGGGGAAAGATGCAGAGTGTGCCATTTGCAGGGAGAACTTGGTTTTAAATGACAAAATGCAAGAGCTGCCATGCAAACACACATTCCACCCACCATGTCTAAAGCCATGGCTGGATGAGCACAATTCTTGTCCCATCTGTCGGTATGAGCTGCAAACTGATGATCATGCTTATGAGAGCTGGAAGGAGCGAGAAAAGGAAGCTGAAGAGGAGAGAAAAGGTGCTGAAAATGCAATTCGAGGTGGTGAATATATGTATGTTTAA 945 0.4444 MESEDLVKQELEELQKQLGKKQKFEASVSSLKCLLQCSYPSASLSLRQSFYSVICRVATVLKSRYTAPGFWNAGLGLFELAYLLVSEPSEKEHLKACIAQAREHLHLEDNPSLQASQFSDNQAHRGYLFEGHLTVDPEPPQPQWLVQSNLLSTAATLFAAESSQASAANETTQEDAANMLQDLINRLEEVVPLMVDEGTVAPRAPPASKEVVAKLPVITLTEEILATLGKDAECAICRENLVLNDKMQELPCKHTFHPPCLKPWLDEHNSCPICRYELQTDDHAYESWKEREKEAEEERKGAENAIRGGEYMYV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0447 314 Pfam Ring finger domain 233 275 IPR001841 -
Pvu1g0447 314 ProSiteProfiles Zinc finger RING-type profile. 234 275 IPR001841 -
Pvu1g0447 314 PANTHER ABI3-INTERACTING PROTEIN 2-1 7 308 - -
Pvu1g0447 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 281 IPR013083 -
Pvu1g0447 314 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 7 308 - -
Pvu1g0447 314 Coils Coil 285 305 - -
Pvu1g0447 314 SMART ring_2 234 274 IPR001841 -
Pvu1g0447 314 SUPERFAMILY RING/U-box 228 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0447 Pvu-Chr1 4573027 4576376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0447 7 314 C3H Transcription Factor Family AT5G20910 65.260 2.98e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0447 K16274 - gmx:100798732 538.88