Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0429 ATGGAACCAACATGCTTGGATACTTCACTCAATCTCAACGTTGATCCTTCTTCTGTCCACATGGATGGGGTTTTGGTGGAAGAGTTGCGGAGACTGAGTGGTGAGAACAAGAGGTTGACTGAGATGTTGACCCAACTGTGTGACAACTATATGGTTCTGCAGAAGCAATTGACCCAATTGATCAACACAAATTTTGAGCAAGACCAACTTGAATCACGCAAGAGAAAAGCAGAGAGTGAATGTTGTACCAACAGATTTGGTGTTGTTAACAACAACAATGGTGAGTGCAGCTCCATAACAGAGGATTCCTTCAAAAGGTACAAGGATTTCAACTCCTCCCCAAAGGTTTCCAAGGTTCTTGTAAAGACCGAAGCTTCCAATAACAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTCACAAGGGATAACCCTTCTCCTAGAGCTTACTTCAAGTGCTCCTTTGCCCCAAGCTGCCCTGTTAAAAAGAAGGTGCAGAGGAGTTTAGAGGACCCTACAATACTTGTTACAACATATGAAGGAGAGCATAACCATGGTAATCAAAGAGGTGAAATATCAGTTGGTTCAAAGCAAAGTGAAGGAACCAAAGGGTCAAGTCCAGTTTCTTCACCAACACACACAATTCGAAGTGCTTGCCCCACTGTGACGCTTGATTTGGTCAAATCAGGATTGGTTGAAAGTGCACAAAAGTCTTCTATCCAACAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAGGGATCCCAATTTCACTACAGCACTTGCCACTGCCATTTCAGGAAAAATTCTAGAGCCCAAATGGTGA 843 0.4247 MEPTCLDTSLNLNVDPSSVHMDGVLVEELRRLSGENKRLTEMLTQLCDNYMVLQKQLTQLINTNFEQDQLESRKRKAESECCTNRFGVVNNNNGECSSITEDSFKRYKDFNSSPKVSKVLVKTEASNNSLYVMDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSLEDPTILVTTYEGEHNHGNQRGEISVGSKQSEGTKGSSPVSSPTHTIRSACPTVTLDLVKSGLVESAQKSSIQQFLVQQMATSLTRDPNFTTALATAISGKILEPKW* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0429 280 Coils Coil 29 49 - -
Pvu1g0429 280 ProSiteProfiles WRKY domain profile. 127 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0429 280 SUPERFAMILY WRKY DNA-binding domain 130 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu1g0429 280 MobiDBLite consensus disorder prediction 194 219 - -
Pvu1g0429 280 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 277 - -
Pvu1g0429 280 MobiDBLite consensus disorder prediction 185 219 - -
Pvu1g0429 280 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 277 IPR044810 GO:0003700
Pvu1g0429 280 SMART WRKY_cls 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0429 280 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0429 280 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0429 Pvu-Chr1 4326381 4327985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0429 6 277 WRKY Transcription Factor Family AT1G80840 46.207 2.24e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu1g0429 WRKY 8.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0429 - - gmx:100810978 447.588