Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0428 ATGCTCGTTCAAGTCCTCACCACTGCAAACATGGTTGATGAAAAGGTGGAAGCTCTTAAGTCTGAGTTAGAGAGAGTGAGAGAGGAGAATAACGCTCTAAGAGTGATGCTTGAAGTTCTAAGCAGCAAGTACACAGTGCTTAAATCCCATCTTCAAGAGATAAACAAGGAACAACACAAGGGCATGAGTTCAAATCAAAGAGGATCAGTAACAGAACCTATCACGGATGCCAACAAGAGACGGAGACTAGAGTTTCCCACAGCAAAAAAACCACTACAAATCTTTGTCAGAACACTCCCCACGGATGATAGTTTGATAGTAAAAGATGGATATCAGTGGAGGAAGTATGGACAGAAGGTCACCAAAGACAATGCTTCACCAAGAGCTTACTTCAGGTGCTCCATGGCTCCCATTTGCCCAGCCAAAAAGAAGGTGCAAAGATGTTTACATGATAAGTCTATCCTGGTTGCAACTTATGATGGAGAGCACAACCATGGTGCCCTTCATGAGTCATCTTCATCCACACCTAGAGGCTCATCAGTGGCCAAACAGTTGCCTAGCATGGCAAATGACAAAGAAGCGATGGACATTTTGGCTCTTTCTAGATGGTCTCAAACAGATAGCAGACACATTGAAGAAGTAATGCATCAAGATAACTATGGTAGCAACATCAAAGTTGAAGAATATGTAAGTTCTCTAATCAAAGATCCTGAGTTCACCATGTCATTAGCAGAAGCAGTTGCCCGCAGCATCACTGGAGAGATCAAGCAGCAAGATCTAGACCTAAATTTGAATATTCCGGAAGAGTGA 810 0.4284 MLVQVLTTANMVDEKVEALKSELERVREENNALRVMLEVLSSKYTVLKSHLQEINKEQHKGMSSNQRGSVTEPITDANKRRRLEFPTAKKPLQIFVRTLPTDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHGALHESSSSTPRGSSVAKQLPSMANDKEAMDILALSRWSQTDSRHIEEVMHQDNYGSNIKVEEYVSSLIKDPEFTMSLAEAVARSITGEIKQQDLDLNLNIPEE* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0428 269 MobiDBLite consensus disorder prediction 58 73 - -
Pvu1g0428 269 MobiDBLite consensus disorder prediction 165 184 - -
Pvu1g0428 269 Pfam WRKY DNA -binding domain 108 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0428 269 PANTHER WRKY TRANSCRIPTION FACTOR 49 10 251 - -
Pvu1g0428 269 Coils Coil 9 43 - -
Pvu1g0428 269 MobiDBLite consensus disorder prediction 168 184 - -
Pvu1g0428 269 Gene3D WRKY domain 94 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu1g0428 269 MobiDBLite consensus disorder prediction 57 77 - -
Pvu1g0428 269 SMART WRKY_cls 107 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0428 269 ProSiteProfiles WRKY domain profile. 102 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0428 269 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 10 251 IPR044810 GO:0003700
Pvu1g0428 269 SUPERFAMILY WRKY DNA-binding domain 103 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0428 Pvu-Chr1 4312182 4314073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0428 13 259 WRKY Transcription Factor Family AT1G80840 36.678 4.29e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu1g0428 WRKY 2.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0428 - - gmx:100170679 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0428 1 4312182 4314073 Pvu9g0897 9 13639295 13640736 PCT